Conservation of cofitness between CSW01_00405 and CSW01_00050 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00405 EamA family transporter 1.0 CSW01_00050 amino acid ABC transporter substrate-binding protein 0.43 10
Rahnella sp. WP5 0.54 EX31_RS14725 DMT family transporter 0.32 EX31_RS09435 cystine ABC transporter substrate-binding protein 0.38 13
Serratia liquefaciens MT49 0.53 IAI46_01025 DMT family transporter 0.33 IAI46_15770 cystine ABC transporter substrate-binding protein low > 86
Enterobacter sp. TBS_079 0.53 MPMX20_04453 Biotin transporter 0.31 MPMX20_02845 L-cystine-binding protein FliY low > 85
Enterobacter asburiae PDN3 0.52 EX28DRAFT_4492 Carboxylate/Amino Acid/Amine Transporter 0.31 EX28DRAFT_0627 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 76
Pectobacterium carotovorum WPP14 0.51 HER17_RS20695 carboxylate/amino acid/amine transporter 0.34 HER17_RS01240 amino acid ABC transporter substrate-binding protein low > 75
Pantoea sp. MT58 0.51 IAI47_18325 DMT family transporter 0.30 IAI47_08175 cystine ABC transporter substrate-binding protein low > 76
Dickeya dianthicola ME23 0.49 DZA65_RS00865 DMT family transporter 0.35 DZA65_RS21155 amino acid ABC transporter substrate-binding protein low > 75
Escherichia coli BW25113 0.49 b3827 yigM predicted inner membrane protein (NCBI) 0.31 b1920 fliY cystine transporter subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.49 ECOLIN_RS26230 biotin transporter 0.31 ECOLIN_RS10965 cystine ABC transporter substrate-binding protein — —
Dickeya dianthicola 67-19 0.49 HGI48_RS00810 DMT family transporter 0.35 HGI48_RS20110 transporter substrate-binding domain-containing protein low > 71
Klebsiella michiganensis M5al 0.48 BWI76_RS01270 hypothetical protein 0.32 BWI76_RS18365 cystine ABC transporter substrate-binding protein low > 92
Dickeya dadantii 3937 0.48 DDA3937_RS22535 DMT family transporter 0.35 DDA3937_RS19955 amino acid ABC transporter substrate-binding protein low > 74
Pseudomonas sp. SVBP6 0.47 COO64_RS21940 carboxylate/amino acid/amine transporter 0.23 COO64_RS00800 tcyJ cystine ABC transporter substrate-binding protein low > 93
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_18295 hypothetical protein 0.27 AO353_11675 cystine transporter subunit low > 101
Pseudomonas sp. DMC3 0.47 GFF2353 Biotin transporter 0.28 GFF4198 L-cystine-binding protein FliY low > 89
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_545 MadN protein 0.29 Pf1N1B4_1693 Cystine ABC transporter, periplasmic cystine-binding protein FliY low > 87
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_4455 MadN protein 0.28 PfGW456L13_444 Cystine ABC transporter, periplasmic cystine-binding protein FliY low > 87
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2678 MadN protein 0.28 Pf6N2E2_3919 Cystine ABC transporter, periplasmic cystine-binding protein FliY low > 103
Pseudomonas sp. BP01 0.46 JOY50_RS01245 carboxylate/amino acid/amine transporter 0.28 JOY50_RS18445 tcyJ cystine ABC transporter substrate-binding protein low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_3822 Protein of unknown function DUF6 0.30 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_3822 Protein of unknown function DUF6 0.30 Psyr_0358 Diaminopimelate-binding protein / L-cystine-binding protein low > 86
Pseudomonas aeruginosa PA14 0.46 IKLFDK_17830 carboxylate/amino acid/amine transporter 0.24 IKLFDK_23875 cystine ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_04220 hypothetical protein 0.28 AO356_10235 cystine transporter subunit low > 104
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS22205 EamA family transporter 0.31 PFLU_RS01215 cystine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS22205 EamA family transporter 0.31 PFLU_RS01215 cystine ABC transporter substrate-binding protein low > 109
Pseudomonas sp. RS175 0.45 PFR28_00752 Biotin transporter 0.27 PFR28_04855 L-cystine-binding protein FliY low > 88
Pseudomonas simiae WCS417 0.45 PS417_20510 membrane protein 0.30 PS417_01105 cystine transporter subunit low > 88
Pseudomonas sp. S08-1 0.45 OH686_12480 MadN protein 0.33 OH686_18905 L-cystine ABC transporter (wide substrate range), substrate-binding protein FliY low > 80
Pseudomonas putida KT2440 0.45 PP_4537 conserved membrane protein of unknown function 0.29 PP_0227 periplasmic cystine-binding protein low > 96

Not shown: 15 genomes with orthologs for CSW01_00405 only; 27 genomes with orthologs for CSW01_00050 only