Conservation of cofitness between CA264_05195 and CA264_04730 in Pontibacter actiniarum KMM 6156, DSM 19842

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pontibacter actiniarum KMM 6156, DSM 19842 1.0 CA264_05195 GDP-fucose synthetase 1.0 CA264_04730 uracil-DNA glycosylase 0.69 4
Mucilaginibacter yixingensis YX-36 DSM 26809 0.80 ABZR88_RS17480 GDP-L-fucose synthase 0.60 ABZR88_RS00735 uracil-DNA glycosylase — —
Pedobacter sp. GW460-11-11-14-LB5 0.79 CA265_RS19675 GDP-fucose synthetase 0.59 CA265_RS10890 uracil-DNA glycosylase low > 88
Desulfovibrio vulgaris Hildenborough JW710 0.68 DVU0090 wcaG GDP-fucose synthetase (TIGR) 0.42 DVU0393 ung uracil-DNA glycosylase (TIGR) — —
Parabacteroides merdae CL09T00C40 0.66 HMPREF1078_RS03850 GDP-L-fucose synthase 0.70 HMPREF1078_RS11205 uracil-DNA glycosylase low > 61
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS33240 GDP-L-fucose synthase 0.45 RR42_RS18320 uracil-DNA glycosylase — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS26355 GDP-L-fucose synthase 0.44 QEN71_RS27575 uracil-DNA glycosylase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF1841 GDP-L-fucose synthetase (EC 1.1.1.271) 0.45 GFF3112 Uracil-DNA glycosylase, family 1 — —
Rhodanobacter denitrificans MT42 0.62 LRK55_RS03655 GDP-L-fucose synthase 0.57 LRK55_RS10645 uracil-DNA glycosylase low > 63
Castellaniella sp019104865 MT123 0.60 ABCV34_RS12930 GDP-L-fucose synthase 0.38 ABCV34_RS15100 uracil-DNA glycosylase — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS12090 GDP-L-fucose synthase 0.55 ECOLIN_RS14600 uracil-DNA glycosylase — —
Escherichia coli ECOR38 0.60 HEPCGN_03050 fcl GDP-L-fucose synthase 0.54 HEPCGN_20465 ung uracil-DNA glycosylase low > 85
Escherichia coli ECRC101 0.60 OKFHMN_24350 fcl GDP-L-fucose synthase 0.55 OKFHMN_21340 ung uracil-DNA glycosylase — —
Escherichia coli ECRC102 0.60 NIAGMN_22295 fcl GDP-L-fucose synthase 0.55 NIAGMN_19110 ung uracil-DNA glycosylase — —
Escherichia coli ECRC101 0.60 MCAODC_20590 fcl GDP-L-fucose synthase 0.55 MCAODC_11870 ung uracil-DNA glycosylase — —
Escherichia coli ECRC98 0.60 JDDGAC_28460 fcl GDP-L-fucose synthase 0.55 JDDGAC_25005 ung uracil-DNA glycosylase — —
Escherichia coli ECRC99 0.60 KEDOAH_03800 fcl GDP-L-fucose synthase 0.55 KEDOAH_06880 ung uracil-DNA glycosylase — —
Escherichia coli BW25113 0.60 b2052 fcl bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) 0.54 b2580 ung uracil-DNA glycosylase (NCBI) low > 76
Escherichia fergusonii Becca 0.60 EFB2_01802 GDP-L-fucose synthase 0.55 EFB2_01316 Uracil-DNA glycosylase low > 86
Escherichia coli ECRC62 0.60 BNILDI_14590 fcl GDP-L-fucose synthase 0.55 BNILDI_11815 ung uracil-DNA glycosylase — —
Escherichia coli ECOR27 0.60 NOLOHH_15680 fcl GDP-L-fucose synthase 0.54 NOLOHH_13010 ung uracil-DNA glycosylase low > 57
Escherichia coli BL21 0.60 ECD_01958 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase 0.55 ECD_02474 uracil-DNA-glycosylase low > 60
Pectobacterium carotovorum WPP14 0.59 HER17_RS14535 GDP-L-fucose synthase 0.54 HER17_RS05755 uracil-DNA glycosylase low > 75
Enterobacter sp. TBS_079 0.59 MPMX20_03034 GDP-L-fucose synthase 0.54 MPMX20_03449 Uracil-DNA glycosylase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3876 GDP-L-fucose synthetase (EC 1.1.1.271) 0.55 GFF2100 Uracil-DNA glycosylase, family 1 low > 78
Enterobacter asburiae PDN3 0.59 EX28DRAFT_0503 Nucleoside-diphosphate-sugar epimerases 0.54 EX28DRAFT_0067 Uracil-DNA glycosylase (EC 3.2.2.-) low > 76
Bacteroides ovatus ATCC 8483 0.58 BACOVA_00512 NAD dependent epimerase/dehydratase family protein 0.70 BACOVA_03224 uracil-DNA glycosylase — —
Bacteroides thetaiotaomicron VPI-5482 0.58 BT1225 GDP-fucose synthetase (NCBI ptt file) 0.69 BT2130 uracil-DNA glycosylase (NCBI ptt file) — —
Bacteroides stercoris CC31F 0.57 HMPREF1181_RS12535 GDP-L-fucose synthase 0.69 HMPREF1181_RS08600 uracil-DNA glycosylase 0.54 43
Phocaeicola vulgatus CL09T03C04 0.57 HMPREF1058_RS17275 GDP-L-fucose synthase 0.70 HMPREF1058_RS07445 uracil-DNA glycosylase 0.65 10
Mycobacterium tuberculosis H37Rv 0.56 Rv1512 Probable nucleotide-sugar epimerase EpiA 0.38 Rv2976c Probable uracil-DNA glycosylase Ung (UDG) low > 58
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS20405 GDP-L-fucose synthase 0.70 ABI39_RS21355 uracil-DNA glycosylase low > 72
Variovorax sp. OAS795 0.56 ABID97_RS19130 GDP-L-fucose synthase 0.39 ABID97_RS05285 uracil-DNA glycosylase low > 91
Pseudomonas stutzeri RCH2 0.55 Psest_1819 Nucleoside-diphosphate-sugar epimerases 0.57 Psest_3107 uracil-DNA glycosylase low > 67
Phaeobacter inhibens DSM 17395 0.55 PGA1_65p00300 GDP-L-fucose synthetase Fcl 0.37 PGA1_c16900 uracil-DNA glycosylase Ung — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS17885 GDP-L-fucose synthase 0.56 PFLU_RS07110 uracil-DNA glycosylase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS17885 GDP-L-fucose synthase 0.56 PFLU_RS07110 uracil-DNA glycosylase low > 109
Agrobacterium fabrum C58 0.55 Atu4790 GDP-fucose synthetase 0.59 Atu2455 uracil-DNA glycosylase low > 89
Variovorax sp. SCN45 0.53 GFF60 GDP-L-fucose synthetase (EC 1.1.1.271) 0.38 GFF5889 Uracil-DNA glycosylase, family 1 (EC 3.2.2.27) low > 127
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_4397 Nucleoside-diphosphate-sugar epimerases 0.70 Echvi_2393 uracil-DNA glycosylase low > 79
Dickeya dianthicola 67-19 0.23 HGI48_RS18610 GDP-L-fucose synthase 0.56 HGI48_RS15875 uracil-DNA glycosylase low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS19745 GDP-L-fucose synthase 0.56 DZA65_RS16955 uracil-DNA glycosylase low > 75
Dickeya dadantii 3937 0.22 DDA3937_RS18680 GDP-L-fucose synthase 0.55 DDA3937_RS15790 uracil-DNA glycosylase low > 74
Rhizobium sp. OAE497 0.14 ABIE40_RS02610 NAD-dependent epimerase/dehydratase family protein 0.59 ABIE40_RS14835 uracil-DNA glycosylase low > 107

Not shown: 15 genomes with orthologs for CA264_05195 only; 41 genomes with orthologs for CA264_04730 only