Conservation of cofitness between BPHYT_RS32430 and BPHYT_RS14195 in Burkholderia phytofirmans PsJN

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS32430 formate dehydrogenase-N subunit gamma 1.0 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.24 12
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS18425 formate dehydrogenase subunit gamma 0.94 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas stutzeri RCH2 0.54 Psest_4106 formate dehydrogenase, gamma subunit 0.69 Psest_0967 carbamoyl-phosphate synthase, small subunit
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3093 Formate dehydrogenase N gamma subunit (EC 1.2.1.2) 0.66 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Azospirillum brasilense Sp245 0.54 AZOBR_RS18420 formate dehydrogenase-N subunit gamma 0.55 AZOBR_RS10920 carbamoyl phosphate synthase small subunit
Dechlorosoma suillum PS 0.53 Dsui_3280 formate dehydrogenase, gamma subunit 0.73 Dsui_3065 carbamoyl-phosphate synthase, small subunit
Azospirillum sp. SherDot2 0.53 MPMX19_03499 Formate dehydrogenase, cytochrome b556(fdo) subunit 0.54 MPMX19_00757 Carbamoyl-phosphate synthase small chain
Pseudomonas putida KT2440 0.52 PP_0491 formate dehydrogenase-O, gamma subunit 0.66 PP_4724 Carbamoyl-phosphate synthase small chain low > 96
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_4949 Formate dehydrogenase N gamma subunit (EC 1.2.1.2) 0.66 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_24975 formate dehydrogenase 0.66 AO353_05635 carbamoyl phosphate synthase small subunit
Enterobacter asburiae PDN3 0.49 EX28DRAFT_4375 formate dehydrogenase, gamma subunit 0.64 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit
Enterobacter sp. TBS_079 0.48 MPMX20_04578 Formate dehydrogenase, cytochrome b556(fdo) subunit 0.62 MPMX20_00739 Carbamoyl-phosphate synthase small chain low > 85
Klebsiella michiganensis M5al 0.48 BWI76_RS19145 formate dehydrogenase cytochrome b556 subunit 0.64 BWI76_RS04465 carbamoyl-phosphate synthase small subunit low > 92
Escherichia coli ECOR27 0.48 NOLOHH_06085 fdoI formate dehydrogenase cytochrome b556 subunit 0.64 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_04159 Formate dehydrogenase, cytochrome b556(fdo) subunit 0.64 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain low > 73
Escherichia coli ECRC62 0.48 BNILDI_05440 fdoI formate dehydrogenase cytochrome b556 subunit 0.64 BNILDI_08325 carA carbamoyl phosphate synthase small subunit low > 75
Escherichia coli BL21 0.48 ECD_03777 formate dehydrogenase-O, cytochrome b556 subunit 0.64 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase low > 61
Escherichia coli ECRC98 0.48 JDDGAC_17590 fdoI formate dehydrogenase cytochrome b556 subunit 0.64 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit low > 86
Escherichia fergusonii Becca 0.48 EFB2_04724 Formate dehydrogenase, cytochrome b556(fdo) subunit 0.64 EFB2_04013 Carbamoyl-phosphate synthase small chain low > 86
Escherichia coli ECRC100 0.48 OKFHMN_13965 fdoI formate dehydrogenase cytochrome b556 subunit 0.64 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit low > 80
Escherichia coli Nissle 1917 0.48 ECOLIN_RS22440 formate dehydrogenase cytochrome b556 subunit 0.64 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 55
Serratia liquefaciens MT49 0.48 IAI46_00220 formate dehydrogenase cytochrome b556 subunit 0.61 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 86
Escherichia coli ECOR38 0.48 HEPCGN_12600 fdoI formate dehydrogenase cytochrome b556 subunit 0.64 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit low > 87
Escherichia coli ECRC99 0.48 KEDOAH_14190 fdoI formate dehydrogenase cytochrome b556 subunit 0.64 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC102 0.48 NIAGMN_11720 fdoI formate dehydrogenase cytochrome b556 subunit 0.64 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC101 0.48 MCAODC_04465 fdoI formate dehydrogenase cytochrome b556 subunit 0.64 MCAODC_01460 carA carbamoyl phosphate synthase small subunit low > 87
Escherichia coli BW25113 0.48 b3892 fdoI formate dehydrogenase-O, cytochrome b556 subunit (NCBI) 0.64 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF2251 Formate dehydrogenase O gamma subunit (EC 1.2.1.2) 0.65 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) low > 78
Dickeya dadantii 3937 0.47 DDA3937_RS14165 formate dehydrogenase cytochrome b556 subunit 0.62 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 74
Dickeya dianthicola ME23 0.47 DZA65_RS14820 formate dehydrogenase cytochrome b556 subunit 0.62 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 75
Rahnella sp. WP5 0.47 EX31_RS05765 formate dehydrogenase cytochrome b556 subunit 0.63 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 89
Dickeya dianthicola 67-19 0.47 HGI48_RS14150 formate dehydrogenase cytochrome b556 subunit 0.62 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.63 40
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS04515 formate dehydrogenase subunit gamma 0.67 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Sinorhizobium meliloti 1021 0.44 SMa0007 formate dehydrogenase subunit gamma 0.49 SMc01569 carbamoyl phosphate synthase small subunit low > 103
Pectobacterium carotovorum WPP14 0.43 HER17_RS14675 formate dehydrogenase-N subunit gamma 0.64 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 75
Variovorax sp. SCN45 0.43 GFF5656 Formate dehydrogenase O gamma subunit (EC 1.2.1.2) 0.71 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Shewanella sp. ANA-3 0.37 Shewana3_2091 formate dehydrogenase gamma subunit (RefSeq) 0.64 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.34 SO0103 fdnI formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit (NCBI ptt file) 0.64 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) low > 76

Not shown: 0 genomes with orthologs for BPHYT_RS32430 only; 66 genomes with orthologs for BPHYT_RS14195 only