Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS32430 | | formate dehydrogenase-N subunit gamma | 1.0 | BPHYT_RS14190 | | carbamoyl phosphate synthase large subunit | 0.26 | 7 |
Paraburkholderia sabiae LMG 24235 | 0.70 | QEN71_RS18425 | | formate dehydrogenase subunit gamma | 0.94 | QEN71_RS04780 | | carbamoyl-phosphate synthase large subunit | — | — |
Pseudomonas stutzeri RCH2 | 0.54 | Psest_4106 | | formate dehydrogenase, gamma subunit | 0.69 | Psest_0968 | | carbamoyl-phosphate synthase, large subunit | — | — |
Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_3093 | | Formate dehydrogenase N gamma subunit (EC 1.2.1.2) | 0.70 | PfGW456L13_5099 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Azospirillum brasilense Sp245 | 0.54 | AZOBR_RS18420 | | formate dehydrogenase-N subunit gamma | 0.60 | AZOBR_RS12895 | | carbamoyl phosphate synthase large subunit | — | — |
Dechlorosoma suillum PS | 0.53 | Dsui_3280 | | formate dehydrogenase, gamma subunit | 0.78 | Dsui_3064 | | carbamoyl-phosphate synthase, large subunit | — | — |
Azospirillum sp. SherDot2 | 0.53 | MPMX19_03499 | | Formate dehydrogenase, cytochrome b556(fdo) subunit | 0.59 | MPMX19_02299 | | Carbamoyl-phosphate synthase large chain | — | — |
Pseudomonas putida KT2440 | 0.52 | PP_0491 | | formate dehydrogenase-O, gamma subunit | 0.69 | PP_4723 | | Carbamoyl-phosphate synthase large chain | low | > 96 |
Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_4949 | | Formate dehydrogenase N gamma subunit (EC 1.2.1.2) | 0.69 | Pf1N1B4_1172 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_24975 | | formate dehydrogenase | 0.70 | AO353_05630 | | carbamoyl phosphate synthase large subunit | — | — |
Enterobacter asburiae PDN3 | 0.49 | EX28DRAFT_4375 | | formate dehydrogenase, gamma subunit | 0.68 | EX28DRAFT_3638 | | carbamoyl-phosphate synthase, large subunit | — | — |
Enterobacter sp. TBS_079 | 0.48 | MPMX20_04578 | | Formate dehydrogenase, cytochrome b556(fdo) subunit | 0.68 | MPMX20_00740 | | Carbamoyl-phosphate synthase large chain | low | > 85 |
Klebsiella michiganensis M5al | 0.48 | BWI76_RS19145 | | formate dehydrogenase cytochrome b556 subunit | 0.68 | BWI76_RS04470 | | carbamoyl phosphate synthase large subunit | low | > 92 |
Serratia liquefaciens MT49 | 0.48 | IAI46_00220 | | formate dehydrogenase cytochrome b556 subunit | 0.68 | IAI46_03195 | | carbamoyl-phosphate synthase large subunit | low | > 86 |
Escherichia coli ECOR38 | 0.48 | HEPCGN_12600 | fdoI | formate dehydrogenase cytochrome b556 subunit | 0.68 | HEPCGN_08925 | carB | carbamoyl-phosphate synthase large subunit | low | > 87 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_04159 | | Formate dehydrogenase, cytochrome b556(fdo) subunit | 0.68 | OHPLBJKB_03624 | | Carbamoyl-phosphate synthase large chain | low | > 73 |
Escherichia coli ECRC99 | 0.48 | KEDOAH_14190 | fdoI | formate dehydrogenase cytochrome b556 subunit | 0.68 | KEDOAH_17215 | carB | carbamoyl-phosphate synthase large subunit | — | — |
Escherichia coli BW25113 | 0.48 | b3892 | fdoI | formate dehydrogenase-O, cytochrome b556 subunit (NCBI) | 0.68 | b0033 | carB | carbamoyl-phosphate synthase large subunit (NCBI) | low | > 76 |
Escherichia coli ECRC100 | 0.48 | OKFHMN_13965 | fdoI | formate dehydrogenase cytochrome b556 subunit | 0.68 | OKFHMN_10940 | carB | carbamoyl-phosphate synthase large subunit | low | > 80 |
Escherichia coli Nissle 1917 | 0.48 | ECOLIN_RS22440 | | formate dehydrogenase cytochrome b556 subunit | 0.68 | ECOLIN_RS00180 | | carbamoyl-phosphate synthase large subunit | low | > 55 |
Escherichia fergusonii Becca | 0.48 | EFB2_04724 | | Formate dehydrogenase, cytochrome b556(fdo) subunit | 0.68 | EFB2_04012 | | Carbamoyl-phosphate synthase large chain | low | > 86 |
Escherichia coli ECOR27 | 0.48 | NOLOHH_06085 | fdoI | formate dehydrogenase cytochrome b556 subunit | 0.68 | NOLOHH_03270 | carB | carbamoyl-phosphate synthase large subunit | low | > 75 |
Escherichia coli ECRC102 | 0.48 | NIAGMN_11720 | fdoI | formate dehydrogenase cytochrome b556 subunit | 0.68 | NIAGMN_08790 | carB | carbamoyl-phosphate synthase large subunit | — | — |
Escherichia coli ECRC101 | 0.48 | MCAODC_04465 | fdoI | formate dehydrogenase cytochrome b556 subunit | 0.68 | MCAODC_01455 | carB | carbamoyl-phosphate synthase large subunit | low | > 87 |
Escherichia coli ECRC98 | 0.48 | JDDGAC_17590 | fdoI | formate dehydrogenase cytochrome b556 subunit | 0.68 | JDDGAC_14535 | carB | carbamoyl-phosphate synthase large subunit | low | > 86 |
Escherichia coli BL21 | 0.48 | ECD_03777 | | formate dehydrogenase-O, cytochrome b556 subunit | 0.68 | ECD_00037 | | carbamoyl-phosphate synthase large subunit | low | > 61 |
Escherichia coli ECRC62 | 0.48 | BNILDI_05440 | fdoI | formate dehydrogenase cytochrome b556 subunit | 0.68 | BNILDI_08330 | carB | carbamoyl-phosphate synthase large subunit | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF2251 | | Formate dehydrogenase O gamma subunit (EC 1.2.1.2) | 0.68 | GFF213 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | low | > 78 |
Dickeya dadantii 3937 | 0.47 | DDA3937_RS14165 | | formate dehydrogenase cytochrome b556 subunit | 0.69 | DDA3937_RS18305 | | carbamoyl-phosphate synthase large subunit | low | > 74 |
Dickeya dianthicola 67-19 | 0.47 | HGI48_RS14150 | | formate dehydrogenase cytochrome b556 subunit | 0.68 | HGI48_RS18240 | | carbamoyl-phosphate synthase large subunit | 0.62 | 46 |
Rahnella sp. WP5 | 0.47 | EX31_RS05765 | | formate dehydrogenase cytochrome b556 subunit | 0.69 | EX31_RS03830 | | carbamoyl-phosphate synthase large subunit | low | > 89 |
Dickeya dianthicola ME23 | 0.47 | DZA65_RS14820 | | formate dehydrogenase cytochrome b556 subunit | 0.68 | DZA65_RS19380 | | carbamoyl-phosphate synthase large subunit | low | > 75 |
Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS04515 | | formate dehydrogenase subunit gamma | 0.69 | ABZR86_RS05600 | | carbamoyl-phosphate synthase large subunit | — | — |
Sinorhizobium meliloti 1021 | 0.44 | SMa0007 | | formate dehydrogenase subunit gamma | 0.59 | SMc01215 | | carbamoyl phosphate synthase large subunit | low | > 103 |
Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS14675 | | formate dehydrogenase-N subunit gamma | 0.68 | HER17_RS02900 | | carbamoyl-phosphate synthase large subunit | low | > 75 |
Variovorax sp. SCN45 | 0.43 | GFF5656 | | Formate dehydrogenase O gamma subunit (EC 1.2.1.2) | 0.77 | GFF376 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Shewanella sp. ANA-3 | 0.37 | Shewana3_2091 | | formate dehydrogenase gamma subunit (RefSeq) | 0.68 | Shewana3_0968 | carB | carbamoyl phosphate synthase large subunit (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.34 | SO0103 | fdnI | formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit (NCBI ptt file) | 0.68 | SO1142 | carB | carbamoyl-phosphate synthase, large subunit (NCBI ptt file) | low | > 76 |
Not shown: 0 genomes with orthologs for BPHYT_RS32430 only; 66 genomes with orthologs for BPHYT_RS14190 only