Conservation of cofitness between BPHYT_RS09015 and BPHYT_RS08035 in Burkholderia phytofirmans PsJN

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS09015 multidrug transporter MatE 1.0 BPHYT_RS08035 LysR family transcriptional regulator 0.29 3
Paraburkholderia bryophila 376MFSha3.1 0.88 H281DRAFT_00822 multidrug resistance protein, MATE family 0.85 H281DRAFT_05098 DNA-binding transcriptional regulator, LysR family low > 103
Paraburkholderia graminis OAS925 0.86 ABIE53_002038 MATE family multidrug resistance protein 0.85 ABIE53_001823 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS22335 MATE family efflux transporter 0.88 QEN71_RS23130 LysR family transcriptional regulator low > 153
Ralstonia solanacearum GMI1000 0.50 RS_RS05915 MATE family efflux transporter 0.54 RS_RS12720 LysR family transcriptional regulator low > 80
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS10730 MATE family efflux transporter 0.50 ABZR87_RS00750 LysR family transcriptional regulator low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS13335 multidrug transporter MatE 0.57 RR42_RS03425 LysR family transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS15100 MATE family efflux transporter 0.54 RALBFv3_RS05100 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS12570 MATE family efflux transporter 0.54 UW163_RS08525 LysR family transcriptional regulator — —
Ralstonia solanacearum PSI07 0.48 RPSI07_RS18275 MATE family efflux transporter 0.54 RPSI07_RS12195 LysR family transcriptional regulator low > 81
Variovorax sp. OAS795 0.36 ABID97_RS14630 MATE family efflux transporter 0.28 ABID97_RS27955 LysR family transcriptional regulator low > 91
Variovorax sp. SCN45 0.29 GFF1099 Na+-driven multidrug efflux pump 0.51 GFF6064 Transcriptional regulator YfeR, LysR family — —
Rahnella sp. WP5 0.24 EX31_RS13855 MATE family efflux transporter 0.51 EX31_RS20145 LysR family transcriptional regulator low > 89
Enterobacter sp. TBS_079 0.24 MPMX20_01973 Multidrug resistance protein MdtK 0.50 MPMX20_03302 HTH-type transcriptional regulator CynR low > 85
Enterobacter asburiae PDN3 0.24 EX28DRAFT_1660 putative efflux protein, MATE family 0.49 EX28DRAFT_0220 Transcriptional regulator low > 76
Dickeya dianthicola 67-19 0.23 HGI48_RS12700 MATE family efflux transporter 0.46 HGI48_RS00115 LysR family transcriptional regulator low > 71
Klebsiella michiganensis M5al 0.23 BWI76_RS16535 MATE family efflux transporter 0.51 BWI76_RS20610 LysR family transcriptional regulator low > 92
Dickeya dianthicola ME23 0.23 DZA65_RS13155 MATE family efflux transporter 0.45 DZA65_RS00130 LysR family transcriptional regulator low > 75
Serratia liquefaciens MT49 0.23 IAI46_11210 MATE family efflux transporter 0.50 IAI46_18415 LysR family transcriptional regulator low > 86
Pantoea sp. MT58 0.23 IAI47_10820 MATE family efflux transporter 0.48 IAI47_05470 LysR family transcriptional regulator low > 76
Escherichia coli BL21 0.23 ECD_01634 multidrug efflux system transporter 0.46 ECD_02308 transcriptional regulator of yefH low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_02061 Multidrug resistance protein MdtK 0.46 OHPLBJKB_01315 HTH-type transcriptional regulator CynR low > 73
Escherichia coli ECOR27 0.23 NOLOHH_17880 mdtK multidrug efflux MATE transporter MdtK 0.46 NOLOHH_13910 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 75
Escherichia coli ECRC100 0.23 OKFHMN_27360 mdtK multidrug efflux MATE transporter MdtK 0.47 OKFHMN_22230 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 80
Escherichia coli ECRC101 0.23 MCAODC_18050 mdtK multidrug efflux MATE transporter MdtK 0.47 MCAODC_12760 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 87
Escherichia coli ECRC98 0.23 JDDGAC_01950 mdtK multidrug efflux MATE transporter MdtK 0.47 JDDGAC_26180 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 86
Escherichia fergusonii Becca 0.23 EFB2_02329 Multidrug resistance protein MdtK 0.46 EFB2_01468 HTH-type transcriptional regulator CynR low > 86
Escherichia coli BW25113 0.23 b1663 mdtK multidrug efflux protein NorM (NCBI) 0.46 b2409 yfeR predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC99 0.23 KEDOAH_00750 mdtK multidrug efflux MATE transporter MdtK 0.47 KEDOAH_05990 yfeR Uncharacterized HTH-type transcriptional regulator YfeR — —
Escherichia coli Nissle 1917 0.23 ECOLIN_RS09270 multidrug efflux MATE transporter MdtK 0.46 ECOLIN_RS13840 LysR family transcriptional regulator — —
Escherichia coli ECRC62 0.23 BNILDI_16670 mdtK multidrug efflux MATE transporter MdtK 0.46 BNILDI_12775 yfeR Uncharacterized HTH-type transcriptional regulator YfeR low > 75
Shewanella loihica PV-4 0.23 Shew_2037 MATE efflux family protein (RefSeq) 0.18 Shew_2387 LysR family transcriptional regulator (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.23 MIT1002_02233 Na(+)/drug antiporter 0.25 MIT1002_02002 putative hydrogen peroxide-inducible genes activator low > 70
Shewanella amazonensis SB2B 0.22 Sama_1761 MATE efflux family protein (RefSeq) 0.17 Sama_1501 LysR family transcriptional regulator (RefSeq) low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3613 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.50 GFF2038 LysR family transcriptional regulator YfeR low > 78
Fusobacterium nucleatum SB010 0.09 HUW76_02280 MATE family efflux transporter 0.14 HUW76_07535 LysR family transcriptional regulator low > 35

Not shown: 26 genomes with orthologs for BPHYT_RS09015 only; 4 genomes with orthologs for BPHYT_RS08035 only