Conservation of cofitness between BNILDI_05030 and BNILDI_06965 in Escherichia coli ECRC62

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_05030 yigI thioesterase family protein 1.0 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.73 5
Escherichia coli ECRC98 1.00 JDDGAC_17995 yigI thioesterase family protein 0.99 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECRC99 1.00 KEDOAH_13780 yigI thioesterase family protein 0.99 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECOR27 1.00 NOLOHH_06500 yigI thioesterase family protein 1.00 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli ECRC102 1.00 NIAGMN_12125 yigI thioesterase family protein 0.99 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECOR38 1.00 HEPCGN_13070 yigI thioesterase family protein 1.00 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia coli BL21 1.00 ECD_03699 4HBT thioesterase family protein 1.00 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase low > 61
Escherichia coli ECRC101 1.00 MCAODC_04875 yigI thioesterase family protein 0.99 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia fergusonii Becca 1.00 EFB2_04817 hypothetical protein 0.99 EFB2_04364 tRNA dimethylallyltransferase low > 86
Escherichia coli ECRC100 1.00 OKFHMN_14370 yigI thioesterase family protein 0.99 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Escherichia coli BW25113 1.00 b3820 yigI orf, hypothetical protein (VIMSS) 1.00 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21925 acyl-CoA thioesterase YigI 1.00 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04231 hypothetical protein 1.00 OHPLBJKB_03871 tRNA dimethylallyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF246 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.90 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 78
Enterobacter sp. TBS_079 0.95 MPMX20_04460 hypothetical protein 0.93 MPMX20_00452 tRNA dimethylallyltransferase low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4485 uncharacterized domain 1 0.93 EX28DRAFT_3368 tRNA dimethylallyltransferase low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS01235 hypothetical protein 0.93 BWI76_RS02530 tRNA dimethylallyltransferase low > 92
Pantoea sp. MT58 0.76 IAI47_18370 thioesterase family protein 0.84 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Serratia liquefaciens MT49 0.69 IAI46_00760 thioesterase family protein 0.83 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 86
Pectobacterium carotovorum WPP14 0.66 HER17_RS01385 thioesterase family protein 0.84 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS20015 thioesterase family protein 0.77 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 71
Rahnella sp. WP5 0.65 EX31_RS15200 thioesterase family protein 0.81 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 89
Dickeya dianthicola ME23 0.65 DZA65_RS21055 thioesterase family protein 0.77 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Dickeya dadantii 3937 0.65 DDA3937_RS19860 thioesterase family protein 0.77 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Shewanella oneidensis MR-1 0.50 SO4242 conserved hypothetical protein (NCBI ptt file) 0.63 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_3764 hypothetical protein (RefSeq) 0.61 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.46 Psest_3735 uncharacterized domain 1 0.59 Psest_0682 tRNA dimethylallyltransferase — —
Shewanella loihica PV-4 0.46 Shew_3475 hypothetical protein (RefSeq) 0.62 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.45 OH686_13975 Uncharacterized protein YigI 0.58 OH686_09475 tRNA dimethylallyltransferase low > 80
Alteromonas macleodii MIT1002 0.41 MIT1002_00149 putative domain 1 0.57 MIT1002_03789 tRNA dimethylallyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF485 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.45 GFF5491 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 90
Acidovorax sp. GW101-3H11 0.28 Ac3H11_1941 putative protein PaaI, possibly involved in aromatic compounds catabolism 0.47 Ac3H11_319 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 79
Dinoroseobacter shibae DFL-12 0.19 Dshi_0843 thioesterase superfamily protein (RefSeq) 0.19 Dshi_1492 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_1115 thioesterase superfamily protein (RefSeq) 0.23 DvMF_0174 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS26185 thioesterase 0.47 BPHYT_RS03645 tRNA dimethylallyltransferase low > 109
Pseudomonas fluorescens SBW25 0.16 PFLU_RS01270 PaaI family thioesterase 0.60 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS01270 PaaI family thioesterase 0.60 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109

Not shown: 0 genomes with orthologs for BNILDI_05030 only; 64 genomes with orthologs for BNILDI_06965 only