Conservation of cofitness between BBR_RS10365 and BBR_RS20125 in Bifidobacterium breve UCC2003

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bifidobacterium breve UCC2003 1.0 BBR_RS10365 LacI family DNA-binding transcriptional regulator 1.0 BBR_RS20125 SIR2 family protein 0.48 10
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_02172 transcriptional regulator, LacI family 0.22 H281DRAFT_03044 NAD-dependent protein deacetylase, SIR2 family — —
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS01830 LacI family transcriptional regulator 0.22 BPHYT_RS29640 NAD-dependent deacetylase low > 109
Paraburkholderia graminis OAS925 0.29 ABIE53_001870 LacI family transcriptional regulator 0.22 ABIE53_005120 NAD-dependent SIR2 family protein deacetylase low > 113
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS00545 LacI family DNA-binding transcriptional regulator 0.23 QEN71_RS20510 NAD-dependent protein deacetylase low > 153
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_14670 transcriptional repressor PurR 0.16 CSW01_07575 NAD-dependent protein deacylase low > 62
Pectobacterium carotovorum WPP14 0.22 HER17_RS03725 LacI family DNA-binding transcriptional regulator 0.17 HER17_RS08800 NAD-dependent protein deacylase low > 75
Shewanella amazonensis SB2B 0.21 Sama_1400 periplasmic binding protein/LacI transcriptional regulator (RefSeq) 0.17 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.30 41
Variovorax sp. SCN45 0.21 GFF3450 Transcriptional regulator, LacI family 0.17 GFF5049 NAD-dependent protein deacetylase of SIR2 family low > 127
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS01690 LacI family DNA-binding transcriptional regulator 0.23 ABZR86_RS05345 NAD-dependent protein deacetylase low > 74
Serratia liquefaciens MT49 0.20 IAI46_25050 ribose operon transcriptional repressor RbsR 0.17 IAI46_10355 NAD-dependent protein deacylase low > 86
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_322 Transcriptional regulator, LacI family 0.21 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family low > 103
Klebsiella michiganensis M5al 0.20 BWI76_RS23355 LacI family transcriptional regulator 0.16 BWI76_RS11230 NAD-dependent deacylase low > 92
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_22285 LacI family transcriptional regulator 0.21 AO356_23430 NAD-dependent deacetylase — —
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_25140 transcriptional regulator 0.20 AO353_26795 NAD-dependent deacetylase low > 101
Escherichia coli ECRC62 0.19 BNILDI_10315 galR HTH-type transcriptional regulator GalR 0.18 BNILDI_19130 cobB NAD-dependent protein deacylase low > 75
Escherichia coli ECOR27 0.19 NOLOHH_11835 galR HTH-type transcriptional regulator GalR 0.18 NOLOHH_20965 cobB NAD-dependent protein deacylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_00892 HTH-type transcriptional regulator GalR 0.18 OHPLBJKB_02546 NAD-dependent protein deacylase low > 73
Escherichia coli BL21 0.19 ECD_02685 galactose-inducible d-galactose regulon transcriptional repressor; autorepressor 0.18 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator low > 61
Escherichia coli BW25113 0.19 b2837 galR DNA-binding transcriptional repressor (NCBI) 0.18 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) low > 76
Escherichia coli Nissle 1917 0.19 ECOLIN_RS15925 HTH-type transcriptional regulator GalR 0.18 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase — —
Escherichia fergusonii Becca 0.19 EFB2_01046 HTH-type transcriptional regulator GalR 0.18 EFB2_02855 NAD-dependent protein deacylase low > 86
Escherichia coli ECOR38 0.19 HEPCGN_19560 galR HTH-type transcriptional regulator GalR 0.18 HEPCGN_24045 cobB NAD-dependent protein deacylase low > 87
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_0757 transcriptional regulator, LacI family 0.17 Psyr_2362 Silent information regulator protein Sir2 — —
Escherichia coli ECRC99 0.19 KEDOAH_08180 galR HTH-type transcriptional regulator GalR 0.18 KEDOAH_24315 cobB NAD-dependent protein deacylase — —
Escherichia coli ECRC102 0.19 NIAGMN_17720 galR HTH-type transcriptional regulator GalR 0.18 NIAGMN_24390 cobB NAD-dependent protein deacylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_0757 transcriptional regulator, LacI family 0.17 Psyr_2362 Silent information regulator protein Sir2 — —
Escherichia coli ECRC100 0.19 OKFHMN_19950 galR HTH-type transcriptional regulator GalR 0.18 OKFHMN_03440 cobB NAD-dependent protein deacylase low > 80
Escherichia coli ECRC98 0.19 JDDGAC_23615 galR HTH-type transcriptional regulator GalR 0.18 JDDGAC_07100 cobB NAD-dependent protein deacylase low > 86
Escherichia coli ECRC101 0.19 MCAODC_10475 galR HTH-type transcriptional regulator GalR 0.18 MCAODC_22800 cobB NAD-dependent protein deacylase low > 87
Bacteroides ovatus ATCC 8483 0.17 BACOVA_03133 sugar-binding domain protein 0.16 BACOVA_02197 transcriptional regulator, Sir2 family low > 94
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS27820 GntR family transcriptional regulator 0.25 RR42_RS27705 NAD-dependent deacetylase low > 128
Azospirillum sp. SherDot2 0.16 MPMX19_02768 Ribose operon repressor 0.16 MPMX19_02648 NAD-dependent protein deacylase low > 112

Not shown: 15 genomes with orthologs for BBR_RS10365 only; 44 genomes with orthologs for BBR_RS20125 only