Conservation of cofitness between B158DRAFT_2275 and B158DRAFT_1312 in Kangiella aquimarina DSM 16071

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_2275 23S rRNA (uracil-5-)-methyltransferase RumA 1.0 B158DRAFT_1312 Superfamily II DNA and RNA helicases 0.44 11
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.40 PFLU_RS22195 DEAD/DEAH box helicase low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.40 PFLU_RS22195 DEAD/DEAH box helicase low > 109
Rahnella sp. WP5 0.36 EX31_RS07960 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 EX31_RS21785 ATP-dependent RNA helicase SrmB low > 89
Pseudomonas simiae WCS417 0.36 PS417_20155 23S rRNA methyltransferase 0.40 PS417_20275 RNA helicase — —
Escherichia coli ECRC102 0.36 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB — —
Escherichia coli ECRC100 0.36 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB low > 80
Escherichia coli ECRC101 0.36 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB low > 87
Escherichia coli ECRC98 0.36 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB low > 86
Escherichia coli ECRC99 0.36 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB — —
Escherichia coli BW25113 0.36 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) 0.30 b2576 srmB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 OHPLBJKB_01131 ATP-dependent RNA helicase SrmB low > 73
Serratia liquefaciens MT49 0.36 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.31 IAI46_19600 ATP-dependent RNA helicase SrmB low > 86
Pseudomonas stutzeri RCH2 0.36 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA 0.41 Psest_1627 Superfamily II DNA and RNA helicases low > 67
Escherichia coli ECOR38 0.36 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB low > 87
Escherichia coli ECRC62 0.36 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB low > 75
Escherichia coli Nissle 1917 0.36 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB low > 55
Escherichia coli BL21 0.35 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent 0.30 ECD_02470 ATP-dependent RNA helicase low > 61
Escherichia coli ECOR27 0.35 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB low > 75
Enterobacter sp. TBS_079 0.35 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 MPMX20_03447 ATP-dependent RNA helicase SrmB low > 85
Dickeya dianthicola ME23 0.35 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 DZA65_RS16945 ATP-dependent RNA helicase SrmB 0.46 38
Escherichia fergusonii Becca 0.35 EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 EFB2_01320 ATP-dependent RNA helicase SrmB low > 86
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.41 Pf1N1B4_543 ATP-dependent RNA helicase SrmB — —
Dickeya dianthicola 67-19 0.35 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 HGI48_RS15865 ATP-dependent RNA helicase SrmB low > 71
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_19055 23S rRNA methyltransferase 0.40 AO356_04210 RNA helicase — —
Pseudomonas sp. S08-1 0.34 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.40 OH686_05415 ATP-dependent RNA helicase SrmB low > 80
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.40 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB low > 103
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA 0.30 EX28DRAFT_0069 Superfamily II DNA and RNA helicases low > 76
Pantoea sp. MT58 0.34 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.31 IAI47_04835 ATP-dependent RNA helicase SrmB low > 76
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_02715 23S rRNA methyltransferase 0.41 AO353_18305 RNA helicase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.40 Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.40 Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.30 GFF2104 ATP-dependent RNA helicase SrmB low > 78
Pseudomonas sp. RS175 0.33 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.41 PFR28_00756 ATP-dependent RNA helicase RhlE low > 88
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.41 PfGW456L13_4451 ATP-dependent RNA helicase SrmB low > 87
Pseudomonas putida KT2440 0.33 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.39 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis low > 96
Erwinia tracheiphila SCR3 0.32 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.30 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB low > 74
Klebsiella michiganensis M5al 0.32 BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase 0.31 BWI76_RS21370 ATP-dependent RNA helicase SrmB low > 92
Shewanella amazonensis SB2B 0.31 Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.31 Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) — —
Shewanella loihica PV-4 0.31 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.31 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.25 MIT1002_00793 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 MIT1002_00941 ATP-dependent RNA helicase SrmB — —

Not shown: 55 genomes with orthologs for B158DRAFT_2275 only; 0 genomes with orthologs for B158DRAFT_1312 only