Conservation of cofitness between Atu0189 and Atu3077 in Agrobacterium fabrum C58

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0189 ABC transporter, membrane spanning protein (peptide) 1.0 Atu3077 beta-lactamase 0.33 17
Rhizobium sp. OAE497 0.85 ABIE40_RS00625 ABC transporter permease 0.43 ABIE40_RS05500 class C beta-lactamase low > 107
Sinorhizobium meliloti 1021 0.84 SMc02830 ABC transporter permease 0.50 SM_b21600 beta-lactamase — —
Azospirillum sp. SherDot2 0.57 MPMX19_02170 Inner membrane ABC transporter permease protein YejE 0.10 MPMX19_01896 D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH low > 112
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.54 Psyr_3364 Beta-lactamase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.54 Psyr_3364 Beta-lactamase low > 86
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_582 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.47 Pf6N2E2_2130 Beta-lactamase (EC 3.5.2.6) low > 103
Pseudomonas sp. S08-1 0.55 OH686_03610 ABC transporter, permease protein 2 0.46 OH686_03730 Class C beta-lactamase low > 80
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_24455 ABC transporter permease 0.46 AO356_01295 class C beta-lactamase low > 104
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS12885 ABC transporter permease 0.44 PFLU_RS16915 class C beta-lactamase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS12885 ABC transporter permease 0.44 PFLU_RS16915 class C beta-lactamase low > 109
Pseudomonas putida KT2440 0.55 PP_4149 putative inner membrane ABC transporter permease protein 0.39 PP_2876 Beta-lactamase low > 96
Pseudomonas sp. RS175 0.55 PFR28_01547 Inner membrane ABC transporter permease protein YejE 0.45 PFR28_01309 Beta-lactamase low > 88
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_4591 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.51 Pf1N1B4_73 Beta-lactamase (EC 3.5.2.6) — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3345 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.47 PfGW456L13_2479 Beta-lactamase (EC 3.5.2.6) low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_23465 ABC transporter permease 0.51 AO353_00425 class C beta-lactamase low > 101
Pseudomonas simiae WCS417 0.53 PS417_12195 ABC transporter permease 0.47 PS417_14895 beta-lactamase/D-alanine carboxypeptidase low > 88
Serratia liquefaciens MT49 0.52 IAI46_17325 ABC transporter permease subunit 0.46 IAI46_11615 beta-lactamase low > 86
Escherichia coli BL21 0.52 ECD_02109 microcin C ABC transporter permease 0.38 ECD_04022 penicillin-binding protein; beta-lactamase, intrinsically weak low > 60
Escherichia coli ECOR27 0.52 NOLOHH_14955 yejE Inner membrane ABC transporter permease protein YejE 0.38 NOLOHH_04625 blaEC BlaEC family class C beta-lactamase low > 57
Escherichia coli Nissle 1917 0.52 ECOLIN_RS12740 ABC transporter permease 0.37 ECOLIN_RS24110 cephalosporin-hydrolyzing class C beta-lactamase EC-5 — —
Escherichia coli ECOR38 0.52 HEPCGN_22645 yejE Inner membrane ABC transporter permease protein YejE 0.37 HEPCGN_10590 blaEC BlaEC family class C beta-lactamase low > 85
Escherichia fergusonii Becca 0.52 EFB2_01677 Inner membrane ABC transporter permease protein YejE 0.37 EFB2_04383 Beta-lactamase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01530 Inner membrane ABC transporter permease protein YejE 0.38 OHPLBJKB_03890 Beta-lactamase low > 73
Escherichia coli ECRC62 0.52 BNILDI_13875 yejE Inner membrane ABC transporter permease protein YejE 0.38 BNILDI_06865 blaEC BlaEC family class C beta-lactamase — —
Escherichia coli BW25113 0.52 b2179 yejE predicted oligopeptide transporter subunit (NCBI) 0.38 b4150 ampC beta-lactamase/D-alanine carboxypeptidase (NCBI) low > 76
Escherichia coli ECRC99 0.52 KEDOAH_04805 yejE Inner membrane ABC transporter permease protein YejE 0.37 KEDOAH_15800 blaEC BlaEC family class C beta-lactamase — —
Escherichia coli ECRC101 0.52 MCAODC_14430 yejE Inner membrane ABC transporter permease protein YejE 0.37 MCAODC_02875 blaEC BlaEC family class C beta-lactamase — —
Escherichia coli ECRC101 0.52 OKFHMN_23380 yejE Inner membrane ABC transporter permease protein YejE 0.37 OKFHMN_12365 blaEC BlaEC family class C beta-lactamase — —
Escherichia coli ECRC102 0.52 NIAGMN_21145 yejE Inner membrane ABC transporter permease protein YejE 0.37 NIAGMN_10210 blaEC BlaEC family class C beta-lactamase — —
Escherichia coli ECRC98 0.52 JDDGAC_27340 yejE Inner membrane ABC transporter permease protein YejE 0.37 JDDGAC_16000 blaEC BlaEC family class C beta-lactamase — —
Pantoea sp. MT58 0.50 IAI47_06605 ABC transporter permease subunit 0.36 IAI47_09850 beta-lactamase 0.25 6
Enterobacter asburiae PDN3 0.49 EX28DRAFT_0382 ABC-type uncharacterized transport system, permease component 0.39 EX28DRAFT_3350 Beta-lactamase class C and other penicillin binding proteins low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_03145 Inner membrane ABC transporter permease protein YejE 0.39 MPMX20_00432 Beta-lactamase low > 85
Rahnella sp. WP5 0.48 EX31_RS19140 ABC transporter permease subunit 0.08 EX31_RS04370 D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH low > 89
Paraburkholderia graminis OAS925 0.43 ABIE53_002548 microcin C transport system permease protein 0.54 ABIE53_006152 beta-lactamase class C low > 113
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS12375 peptide ABC transporter permease 0.57 BPHYT_RS25150 class C beta-lactamase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_00562 microcin C transport system permease protein 0.56 H281DRAFT_02462 beta-lactamase class C low > 103
Variovorax sp. SCN45 0.42 GFF227 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) 0.08 GFF2108 hypothetical protein low > 127

Not shown: 29 genomes with orthologs for Atu0189 only; 7 genomes with orthologs for Atu3077 only