Conservation of cofitness between AO353_26720 and AO353_07635 in Pseudomonas fluorescens FW300-N2E3

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_26720 LysR family transcriptional regulator 1.0 AO353_07635 aldehyde dismutase 0.35 2
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS27430 LysR family transcriptional regulator 0.76 BPHYT_RS25170 aldehyde dismutase low > 109
Pseudomonas simiae WCS417 0.72 PS417_07220 LysR family transcriptional regulator 0.93 PS417_26165 aldehyde dismutase low > 88
Pseudomonas fluorescens SBW25 0.72 PFLU_RS07335 LysR family transcriptional regulator 0.93 PFLU_RS27795 formaldehyde dehydrogenase, glutathione-independent low > 109
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS07335 LysR family transcriptional regulator 0.93 PFLU_RS27795 formaldehyde dehydrogenase, glutathione-independent 0.12 25
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3165 transcriptional regulator, LysR family 0.90 Psyr_4718 glutathione-independent formaldehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3165 transcriptional regulator, LysR family 0.90 Psyr_4718 glutathione-independent formaldehyde dehydrogenase low > 86
Paraburkholderia graminis OAS925 0.68 ABIE53_005445 DNA-binding transcriptional LysR family regulator 0.77 ABIE53_006146 glutathione-independent formaldehyde dehydrogenase low > 113
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS08345 LysR family transcriptional regulator 0.20 ABZR87_RS23040 zinc-dependent alcohol dehydrogenase low > 80
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS11315 LysR family transcriptional regulator 0.78 QEN71_RS08185 formaldehyde dehydrogenase, glutathione-independent 0.32 127
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_03335 transcriptional regulator, LysR family 0.80 H281DRAFT_02466 glutathione-independent formaldehyde dehydrogenase low > 103
Pantoea sp. MT58 0.59 IAI47_10140 LysR family transcriptional regulator 0.33 IAI47_21190 glutathione-independent formaldehyde dehydrogenase low > 76
Enterobacter asburiae PDN3 0.58 EX28DRAFT_0581 Transcriptional regulator 0.22 EX28DRAFT_2347 Threonine dehydrogenase and related Zn-dependent dehydrogenases low > 76
Enterobacter sp. TBS_079 0.57 MPMX20_02971 HTH-type transcriptional regulator CynR 0.22 MPMX20_01274 putative zinc-binding alcohol dehydrogenase low > 85
Pseudomonas putida KT2440 0.51 PP_2054 putative DNA-binding transcriptional regulator 0.88 PP_0328 formaldehyde dehydrogenase 0.18 3
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_28895 LysR family transcriptional regulator 0.93 AO356_14000 aldehyde dismutase low > 104
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_4462 LysR family transcriptional regulator YbhD 1.00 Pf1N1B4_2461 Threonine dehydrogenase and related Zn-dependent dehydrogenases low > 87
Pseudomonas sp. RS175 0.51 PFR28_01942 HTH-type transcriptional regulator CynR 0.92 PFR28_04129 Glutathione-independent formaldehyde dehydrogenase low > 88
Azospirillum brasilense Sp245 0.47 AZOBR_RS28100 LysR family transcriptional regulator 0.20 AZOBR_RS20965 alcohol dehydrogenase low > 97
Azospirillum sp. SherDot2 0.47 MPMX19_03557 HTH-type transcriptional regulator CynR 0.20 MPMX19_06172 putative zinc-binding alcohol dehydrogenase low > 112
Agrobacterium fabrum C58 0.43 Atu4264 LysR family transcriptional regulator 0.71 Atu1567 glutathione-independent formaldehyde dehydrogenase low > 89
Escherichia coli ECOR27 0.40 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.22 NOLOHH_23870 ybdR Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR low > 75
Escherichia coli BW25113 0.40 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) 0.22 b0608 ybdR predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC102 0.40 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.22 NIAGMN_05550 ybdR Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR — —
Escherichia coli ECRC62 0.40 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.22 BNILDI_21880 ybdR Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR low > 75
Escherichia coli ECRC101 0.40 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.22 MCAODC_26710 ybdR Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR low > 87
Escherichia coli ECRC100 0.40 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.22 OKFHMN_07495 ybdR Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR low > 80
Escherichia coli ECRC98 0.40 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.22 JDDGAC_11140 ybdR Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator 0.22 OHPLBJKB_03097 putative zinc-binding alcohol dehydrogenase low > 73
Escherichia coli ECRC99 0.40 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.22 KEDOAH_20475 ybdR Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS07340 LysR family transcriptional regulator 0.23 HSERO_RS02795 alcohol dehydrogenase 0.21 46
Bosea sp. OAE506 0.32 ABIE41_RS16550 LysR family transcriptional regulator 0.23 ABIE41_RS00965 zinc-dependent alcohol dehydrogenase low > 77
Ralstonia solanacearum GMI1000 0.28 RS_RS12720 LysR family transcriptional regulator 0.79 RS_RS17450 formaldehyde dehydrogenase, glutathione-independent low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF2038 LysR family transcriptional regulator YfeR 0.21 GFF4521 Uncharacterized zinc-type alcohol dehydrogenase-like protein ybdR low > 78
Escherichia coli BL21 0.22 ECD_02308 transcriptional regulator of yefH 0.22 ECD_00577 putative Zn-dependent NAD(P)-binding oxidoreductase low > 61

Not shown: 19 genomes with orthologs for AO353_26720 only; 14 genomes with orthologs for AO353_07635 only