Conservation of cofitness between ABZR87_RS17835 and ABZR87_RS16180 in Ralstonia sp. UNC404CL21Col

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS17835 NAD(P)-dependent oxidoreductase 1.0 ABZR87_RS16180 arginine/lysine/ornithine decarboxylase 0.33 14
Pectobacterium carotovorum WPP14 0.54 HER17_RS21015 NAD(P)-dependent oxidoreductase 0.22 HER17_RS16680 ornithine decarboxylase low > 75
Enterobacter sp. TBS_079 0.52 MPMX20_02610 2-alkyl-3-oxoalkanoate reductase 0.31 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Rahnella sp. WP5 0.51 EX31_RS18615 NAD(P)-dependent oxidoreductase 0.31 EX31_RS12950 lysine decarboxylase LdcC low > 89
Serratia liquefaciens MT49 0.51 IAI46_08445 NAD(P)-dependent oxidoreductase 0.32 IAI46_20145 lysine decarboxylase CadA low > 86
Escherichia coli Nissle 1917 0.51 ECOLIN_RS07420 NAD(P)-dependent oxidoreductase 0.34 ECOLIN_RS23825 arginine decarboxylase — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_10360 hypothetical protein 0.47 AO353_23560 lysine decarboxylase low > 101
Escherichia coli BL21 0.49 ECD_00873 putative NAD(P)H-dependent oxidoreductase 0.34 ECD_03988 arginine decarboxylase low > 61
Klebsiella michiganensis M5al 0.49 BWI76_RS09540 hypothetical protein 0.32 BWI76_RS07195 lysine decarboxylase CadA low > 92
Escherichia coli ECRC101 0.49 MCAODC_25075 ybjS Uncharacterized protein YbjS 0.34 MCAODC_03060 adiA arginine decarboxylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_02800 Aurachin B dehydrogenase 0.34 OHPLBJKB_03927 Biodegradative arginine decarboxylase low > 73
Escherichia coli ECOR27 0.49 NOLOHH_22255 ybjS Uncharacterized protein YbjS 0.34 NOLOHH_04815 adiA arginine decarboxylase low > 75
Escherichia coli ECRC62 0.49 BNILDI_20510 ybjS Uncharacterized protein YbjS 0.34 BNILDI_06675 adiA arginine decarboxylase low > 75
Escherichia coli BW25113 0.49 b0868 b0868 putative nucleotide di-P-sugar epimerase or dehydratase (VIMSS) 0.34 b4117 adiA biodegradative arginine decarboxylase (RefSeq) low > 76
Escherichia coli ECRC100 0.49 OKFHMN_05860 ybjS Uncharacterized protein YbjS 0.34 OKFHMN_12550 adiA arginine decarboxylase low > 80
Escherichia coli ECRC99 0.49 KEDOAH_22050 ybjS Uncharacterized protein YbjS 0.34 KEDOAH_15615 adiA arginine decarboxylase — —
Escherichia coli ECRC102 0.49 NIAGMN_03900 ybjS Uncharacterized protein YbjS 0.34 NIAGMN_10395 adiA arginine decarboxylase — —
Escherichia fergusonii Becca 0.48 EFB2_03193 2-alkyl-3-oxoalkanoate reductase 0.34 EFB2_04465 Biodegradative arginine decarboxylase low > 86
Escherichia coli ECOR38 0.48 HEPCGN_02155 ybjS Uncharacterized protein YbjS 0.34 HEPCGN_11185 adiA arginine decarboxylase low > 87
Escherichia coli ECRC98 0.48 JDDGAC_09495 ybjS Uncharacterized protein YbjS 0.34 JDDGAC_16185 adiA arginine decarboxylase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF4914 Putative nucleotide di-P-sugar epimerase or dehydratase 0.34 GFF1473 Arginine decarboxylase, catabolic (EC 4.1.1.19) low > 78
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2065 Nucleoside-diphosphate-sugar epimerases 0.31 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF4994 FIG036672: Nucleoside-diphosphate-sugar epimerase 0.74 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) — —
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_707 Nucleoside-diphosphate-sugar epimerases 0.47 Pf1N1B4_4600 Lysine decarboxylase, inducible (EC 4.1.1.18) low > 87
Pseudomonas sp. S08-1 0.24 OH686_07185 NAD(P)H steroid dehydrogenase 0.48 OH686_03560 Lysine decarboxylase, inducible low > 80
Pseudomonas simiae WCS417 0.24 PS417_22160 3-beta hydroxysteroid dehydrogenase 0.47 PS417_12240 lysine decarboxylase low > 88
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_1783 Nucleoside-diphosphate-sugar epimerases 0.47 PfGW456L13_3336 Lysine decarboxylase, inducible (EC 4.1.1.18) low > 87
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS23785 NAD-dependent epimerase/dehydratase family protein 0.47 PFLU_RS12930 lysine decarboxylase low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS23785 NAD-dependent epimerase/dehydratase family protein 0.47 PFLU_RS12930 lysine decarboxylase low > 109
Pseudomonas putida KT2440 0.23 PP_0918 putative 3-beta hydroxysteroid dehydrogenase/isomerase family protein 0.45 PP_4140 lysine decarboxylase low > 96
Shewanella oneidensis MR-1 0.17 SO1745 3-beta hydroxysteroid dehydrogenase/isomerase family protein (NCBI ptt file) 0.23 SO0314 speF ornithine decarboxylase, inducible (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.17 Sama_1185 steroid dehydrogenase (RefSeq) 0.23 Sama_3334 ornithine decarboxylase (RefSeq) low > 62
Shewanella sp. ANA-3 0.17 Shewana3_2712 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) 0.23 Shewana3_3871 ornithine decarboxylase (RefSeq) low > 73
Azospirillum sp. SherDot2 0.14 MPMX19_01806 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase 0.29 MPMX19_05197 Inducible ornithine decarboxylase — —
Acidovorax sp. GW101-3H11 0.11 Ac3H11_1071 Dihydroflavonol-4-reductase (EC 1.1.1.219) 0.74 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) — —
Azospirillum brasilense Sp245 0.10 AZOBR_RS09095 NAD-dependent dehydratase 0.29 AZOBR_RS27535 amino acid decarboxylase — —
Castellaniella sp019104865 MT123 0.10 ABCV34_RS13025 NAD-dependent epimerase/dehydratase family protein 0.75 ABCV34_RS08900 arginine/lysine/ornithine decarboxylase — —

Not shown: 15 genomes with orthologs for ABZR87_RS17835 only; 21 genomes with orthologs for ABZR87_RS16180 only