Conservation of cofitness between Shew_2934 and Shew_1386 in Shewanella loihica PV-4

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) 1.0 Shew_1386 CheA signal transduction histidine kinase (RefSeq) 0.64 3
Shewanella amazonensis SB2B 0.94 Sama_2587 rRNA large subunit methyltransferase (RefSeq) 0.71 Sama_2277 putative CheA signal transduction histidine kinase (RefSeq) low > 62
Shewanella sp. ANA-3 0.93 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.73 Shewana3_1362 CheA signal transduction histidine kinases (RefSeq) low > 73
Shewanella oneidensis MR-1 0.93 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) 0.71 SO3207 chemotaxis protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.81 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.56 CSW01_10320 chemotaxis protein CheA low > 62
Alteromonas macleodii MIT1002 0.76 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.56 MIT1002_01106 Chemotaxis protein CheA — —
Marinobacter adhaerens HP15 0.61 HP15_604 conserved hypothetical protein CHP00246 0.53 HP15_2298 chemotaxis histidine kinase low > 73
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4366 Protein of unknown function DUF163 0.52 Psyr_3434 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt — —
Pseudomonas putida KT2440 0.60 PP_4808 23S rRNA m3psi1915 methyltransferase 0.44 PP_4338 Chemotaxis histidine kinase CheA low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4366 Protein of unknown function DUF163 0.52 Psyr_3434 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt low > 86
Pseudomonas fluorescens SBW25 0.60 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.51 PFLU_RS21645 chemotaxis protein CheA low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.51 PFLU_RS21645 chemotaxis protein CheA low > 109
Pseudomonas simiae WCS417 0.60 PS417_24730 50S rRNA methyltransferase 0.43 PS417_19680 chemotaxis protein CheA — —
Pseudomonas sp. RS175 0.60 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.54 PFR28_00855 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_06480 50S rRNA methyltransferase 0.52 AO353_18800 chemotaxis protein CheA low > 101
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.43 PfGW456L13_4328 Signal transduction histidine kinase CheA (EC 2.7.3.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_15305 50S rRNA methyltransferase 0.53 AO356_03715 chemotaxis protein CheA low > 104
Pseudomonas sp. S08-1 0.59 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH 0.53 OH686_02715 Signal transduction histidine kinase CheA low > 80
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.43 Pf1N1B4_3629 Signal transduction histidine kinase CheA (EC 2.7.3.-) — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.52 Pf6N2E2_2570 Signal transduction histidine kinase CheA (EC 2.7.3.-) low > 103
Pseudomonas stutzeri RCH2 0.57 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH 0.54 Psest_1743 Chemotaxis protein histidine kinase and related kinases low > 67
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS09055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.30 ABZR86_RS20280 chemotaxis protein CheA low > 74

Not shown: 73 genomes with orthologs for Shew_2934 only; 0 genomes with orthologs for Shew_1386 only