Conservation of cofitness between Dshi_2798 and Dshi_1099 in Dinoroseobacter shibae DFL-12

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_2798 D-tyrosyl-tRNA(Tyr) deacylase (RefSeq) 1.0 Dshi_1099 peptide methionine sulfoxide reductase (RefSeq) 0.50 18
Rahnella sp. WP5 0.54 EX31_RS15850 D-tyrosyl-tRNA(Tyr) deacylase 0.55 EX31_RS08700 peptide-methionine (S)-S-oxide reductase MsrA 0.31 41
Enterobacter sp. TBS_079 0.54 MPMX20_04582 D-aminoacyl-tRNA deacylase 0.52 MPMX20_00502 Peptide methionine sulfoxide reductase MsrA low > 85
Pectobacterium carotovorum WPP14 0.53 HER17_RS21415 D-aminoacyl-tRNA deacylase 0.55 HER17_RS03975 peptide-methionine (S)-S-oxide reductase MsrA low > 75
Dickeya dianthicola 67-19 0.53 HGI48_RS21210 D-tyrosyl-tRNA(Tyr) deacylase 0.54 HGI48_RS17220 peptide-methionine (S)-S-oxide reductase MsrA low > 71
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.4731.1 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) 0.59 Xcc-8004.4229.1 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) low > 74
Dickeya dianthicola ME23 0.53 DZA65_RS22185 D-tyrosyl-tRNA(Tyr) deacylase 0.54 DZA65_RS18300 peptide-methionine (S)-S-oxide reductase MsrA low > 75
Klebsiella michiganensis M5al 0.52 BWI76_RS00425 D-tyrosyl-tRNA(Tyr) deacylase 0.52 BWI76_RS02770 peptide-methionine (S)-S-oxide reductase low > 92
Enterobacter asburiae PDN3 0.52 EX28DRAFT_4369 D-tyrosyl-tRNA(Tyr) deacylase 0.52 EX28DRAFT_3405 methionine-S-sulfoxide reductase low > 76
Dickeya dadantii 3937 0.52 DDA3937_RS00150 D-tyrosyl-tRNA(Tyr) deacylase 0.55 DDA3937_RS17165 peptide-methionine (S)-S-oxide reductase MsrA low > 74
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_13825 D-aminoacyl-tRNA deacylase 0.58 CSW01_12910 peptide-methionine (S)-S-oxide reductase low > 62
Escherichia coli ECRC62 0.51 BNILDI_05395 dtd D-aminoacyl-tRNA deacylase 0.51 BNILDI_07250 msrA Peptide methionine sulfoxide reductase MsrA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_04167 D-aminoacyl-tRNA deacylase 0.51 OHPLBJKB_03814 Peptide methionine sulfoxide reductase MsrA low > 73
Escherichia coli ECRC102 0.51 NIAGMN_11755 dtd D-aminoacyl-tRNA deacylase 0.51 NIAGMN_09855 msrA Peptide methionine sulfoxide reductase MsrA
Escherichia coli ECRC98 0.51 JDDGAC_17625 dtd D-aminoacyl-tRNA deacylase 0.51 JDDGAC_15645 msrA Peptide methionine sulfoxide reductase MsrA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2242 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) 0.51 GFF872 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) low > 78
Escherichia coli BL21 0.51 ECD_03772 D-tyr-tRNA(Tyr) deacylase 0.51 ECD_04090 methionine sulfoxide reductase A low > 61
Escherichia coli BW25113 0.51 b3887 dtd D-tyrosyl-tRNA deacylase (NCBI) 0.51 b4219 msrA methionine sulfoxide reductase A (NCBI) low > 76
Escherichia coli Nissle 1917 0.51 ECOLIN_RS22385 D-aminoacyl-tRNA deacylase 0.50 ECOLIN_RS24500 peptide-methionine (S)-S-oxide reductase MsrA low > 55
Escherichia coli ECRC99 0.51 KEDOAH_14155 dtd D-aminoacyl-tRNA deacylase 0.51 KEDOAH_16150 msrA Peptide methionine sulfoxide reductase MsrA
Escherichia coli ECRC101 0.51 MCAODC_04500 dtd D-aminoacyl-tRNA deacylase 0.51 MCAODC_02520 msrA Peptide methionine sulfoxide reductase MsrA low > 87
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_312 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) 0.56 PfGW456L13_218 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) low > 87
Escherichia coli ECOR27 0.51 NOLOHH_06135 dtd D-aminoacyl-tRNA deacylase 0.51 NOLOHH_04265 msrA Peptide methionine sulfoxide reductase MsrA low > 75
Escherichia coli ECRC100 0.51 OKFHMN_14000 dtd D-aminoacyl-tRNA deacylase 0.51 OKFHMN_12005 msrA Peptide methionine sulfoxide reductase MsrA low > 80
Escherichia fergusonii Becca 0.51 EFB2_04731 D-aminoacyl-tRNA deacylase 0.51 EFB2_04310 Peptide methionine sulfoxide reductase MsrA low > 86
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3793 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) 0.58 Pf6N2E2_3678 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) low > 103
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS13940 D-aminoacyl-tRNA deacylase 0.53 ABZR86_RS19340 peptide-methionine (S)-S-oxide reductase MsrA low > 74
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_09570 D-tyrosyl-tRNA(Tyr) deacylase 0.57 AO356_08980 peptide methionine sulfoxide reductase low > 104
Serratia liquefaciens MT49 0.51 IAI46_24930 D-tyrosyl-tRNA(Tyr) deacylase 0.57 IAI46_01765 peptide-methionine (S)-S-oxide reductase MsrA low > 86
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_12305 D-tyrosyl-tRNA(Tyr) deacylase 0.60 AO353_12845 peptide methionine sulfoxide reductase low > 101
Escherichia coli ECOR38 0.51 HEPCGN_12635 dtd D-aminoacyl-tRNA deacylase 0.51 HEPCGN_10205 msrA Peptide methionine sulfoxide reductase MsrA low > 87
Pseudomonas sp. RS175 0.51 PFR28_04977 D-aminoacyl-tRNA deacylase 0.57 PFR28_05057 Peptide methionine sulfoxide reductase MsrA low > 88
Pseudomonas putida KT2440 0.48 PP_5027 D-tyrosyl-tRNA(Tyr) deacylase 0.54 PP_0336 Peptide methionine sulfoxide reductase MsrA low > 96
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0727 D-tyrosyl-tRNA(Tyr) deacylase 0.46 B158DRAFT_1498 methionine-S-sulfoxide reductase low > 40
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS20265 D-aminoacyl-tRNA deacylase 0.31 ABZR88_RS03155 peptide-methionine (S)-S-oxide reductase MsrA low > 71
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_1574 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) 0.58 Pf1N1B4_1480 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_0376 D-tyrosyl-tRNA(Tyr) deacylase 0.57 Psyr_4771 Peptide methionine sulfoxide reductase low > 86
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_0376 D-tyrosyl-tRNA(Tyr) deacylase 0.57 Psyr_4771 Peptide methionine sulfoxide reductase low > 86
Pseudomonas fluorescens SBW25 0.44 PFLU_RS01830 D-tyrosyl-tRNA(Tyr) deacylase 0.55 PFLU_RS02260 peptide-methionine (S)-S-oxide reductase MsrA low > 109
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS01830 D-tyrosyl-tRNA(Tyr) deacylase 0.55 PFLU_RS02260 peptide-methionine (S)-S-oxide reductase MsrA low > 109
Pseudomonas simiae WCS417 0.44 PS417_01785 D-tyrosyl-tRNA(Tyr) deacylase 0.56 PS417_02205 peptide methionine sulfoxide reductase

Not shown: 45 genomes with orthologs for Dshi_2798 only; 11 genomes with orthologs for Dshi_1099 only