Conservation of cofitness between BT0544 and BT3320 in Bacteroides thetaiotaomicron VPI-5482

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0544 ammonium transporter (NCBI ptt file) 1.0 BT3320 dihydrodipicolinate reductase (NCBI ptt file) 0.47 19
Bacteroides stercoris CC31F 0.78 HMPREF1181_RS16015 ammonium transporter 0.85 HMPREF1181_RS02275 4-hydroxy-tetrahydrodipicolinate reductase low > 56
Phocaeicola vulgatus CL09T03C04 0.75 HMPREF1058_RS06895 ammonium transporter 0.86 HMPREF1058_RS11730 4-hydroxy-tetrahydrodipicolinate reductase low > 67
Phocaeicola dorei CL03T12C01 0.74 ABI39_RS14275 ammonium transporter 0.86 ABI39_RS05175 4-hydroxy-tetrahydrodipicolinate reductase low > 72
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_1454 ammonium transporter 0.37 Echvi_2395 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) (from data) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS11465 ammonium transporter 0.44 ABZR88_RS02050 4-hydroxy-tetrahydrodipicolinate reductase — —
Shewanella oneidensis MR-1 0.29 SO0760 amt ammonium transporter (NCBI ptt file) 0.13 SO_1140 dapB dihydrodipicolinate reductase (RefSeq) — —
Shewanella sp. ANA-3 0.29 Shewana3_3531 Rh family protein/ammonium transporter (RefSeq) 0.13 Shewana3_0966 dihydrodipicolinate reductase (RefSeq) — —
Pseudomonas sp. S08-1 0.27 OH686_13765 Ammonium transporter 0.18 OH686_17070 4-hydroxy-tetrahydrodipicolinate reductase — —
Bacteroides ovatus ATCC 8483 0.23 BACOVA_03766 ammonium transporter 0.91 BACOVA_00959 dihydrodipicolinate reductase low > 94
Methanococcus maripaludis JJ 0.23 MMJJ_RS05110 ammonium transporter 0.18 MMJJ_RS00345 4-hydroxy-tetrahydrodipicolinate reductase low > 28
Methanococcus maripaludis S2 0.22 MMP_RS00375 ammonium transporter 0.18 MMP_RS04790 4-hydroxy-tetrahydrodipicolinate reductase low > 25
Enterobacter sp. TBS_079 0.22 MPMX20_01043 Ammonia channel 0.15 MPMX20_00738 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli Nissle 1917 0.21 ECOLIN_RS02700 ammonium transporter AmtB 0.16 ECOLIN_RS00160 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia fergusonii Becca 0.21 EFB2_03606 Ammonia channel 0.16 EFB2_04014 4-hydroxy-tetrahydrodipicolinate reductase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF4368 Ammonium transporter 0.16 GFF216 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) — —
Escherichia coli ECOR38 0.21 HEPCGN_06875 amtB ammonium transporter AmtB 0.16 HEPCGN_08940 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli BL21 0.21 ECD_00403 ammonium transporter 0.15 ECD_00035 dihydrodipicolinate reductase — —
Escherichia coli ECRC102 0.21 NIAGMN_06315 amtB ammonium transporter AmtB 0.16 NIAGMN_08805 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC100 0.21 OKFHMN_08260 amtB ammonium transporter AmtB 0.16 OKFHMN_10955 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECOR27 0.21 NOLOHH_01195 amtB ammonium transporter AmtB 0.15 NOLOHH_03285 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC62 0.21 BNILDI_22610 amtB ammonium transporter AmtB 0.16 BNILDI_08315 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC99 0.21 KEDOAH_19705 amtB ammonium transporter AmtB 0.16 KEDOAH_17200 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_03222 Ammonia channel 0.15 OHPLBJKB_03626 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli ECRC101 0.21 MCAODC_27485 amtB ammonium transporter AmtB 0.16 MCAODC_01470 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Escherichia coli BW25113 0.21 b0451 amtB ammonium transporter (NCBI) 0.16 b0031 dapB dihydrodipicolinate reductase (NCBI) — —
Escherichia coli ECRC98 0.21 JDDGAC_11915 amtB ammonium transporter AmtB 0.16 JDDGAC_14550 dapB 4-hydroxy-tetrahydrodipicolinate reductase — —
Magnetospirillum magneticum AMB-1 0.20 AMB_RS00080 ammonium transporter 0.17 AMB_RS22745 4-hydroxy-tetrahydrodipicolinate reductase — —
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS14975 ammonia channel protein 0.45 CA265_RS15670 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) (from data) — —
Dickeya dianthicola 67-19 0.19 HGI48_RS05745 ammonium transporter AmtB 0.16 HGI48_RS18250 4-hydroxy-tetrahydrodipicolinate reductase — —
Dickeya dianthicola ME23 0.19 DZA65_RS06070 ammonium transporter AmtB 0.16 DZA65_RS19390 4-hydroxy-tetrahydrodipicolinate reductase — —
Dechlorosoma suillum PS 0.18 Dsui_1062 ammonia permease 0.17 Dsui_3066 dihydrodipicolinate reductase low > 51
Rhizobium sp. OAE497 0.18 ABIE40_RS18420 ammonium transporter 0.14 ABIE40_RS13905 4-hydroxy-tetrahydrodipicolinate reductase low > 107
Dickeya dadantii 3937 0.17 DDA3937_RS05700 ammonium transporter AmtB 0.16 DDA3937_RS18315 4-hydroxy-tetrahydrodipicolinate reductase — —
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_01399 ammonium transporter/methylammonium transporter 0.16 CCNA_03664 dihydrodipicolinate reductase — —
Caulobacter crescentus NA1000 0.17 CCNA_01399 ammonium transporter/methylammonium transporter 0.16 CCNA_03664 dihydrodipicolinate reductase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.17 A4249_RS09990 ammonium transporter 0.15 A4249_RS13645 4-hydroxy-tetrahydrodipicolinate reductase — —
Castellaniella sp019104865 MT123 0.16 ABCV34_RS04770 ammonium transporter 0.16 ABCV34_RS07485 4-hydroxy-tetrahydrodipicolinate reductase — —
Bifidobacterium breve UCC2003 0.15 BBR_RS11515 ammonium transporter 0.15 BBR_RS12990 4-hydroxy-tetrahydrodipicolinate reductase low > 34
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_09145 ammonia channel protein 0.36 CA264_04750 4-hydroxy-tetrahydrodipicolinate reductase — —
Mycobacterium tuberculosis H37Rv 0.14 Rv2920c Probable ammonium-transport integral membrane protein Amt 0.16 Rv2773c Dihydrodipicolinate reductase DapB (DHPR) — —

Not shown: 60 genomes with orthologs for BT0544 only; 2 genomes with orthologs for BT3320 only