Conservation of cofitness between BT0378 and BT0682 in Bacteroides thetaiotaomicron VPI-5482

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0378 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) 1.0 BT0682 two-component system response regulator (NCBI ptt file) 0.22 6
Bacteroides ovatus ATCC 8483 0.76 BACOVA_03688 polysaccharide biosynthesis protein 0.86 BACOVA_02385 response regulator receiver domain protein low > 94
Parabacteroides merdae CL09T00C40 0.47 HMPREF1078_RS01480 nucleoside-diphosphate sugar epimerase/dehydratase 0.66 HMPREF1078_RS01665 response regulator transcription factor low > 61
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS13770 polysaccharide biosynthesis protein 0.72 ABI39_RS05370 response regulator transcription factor 0.37 35
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS04385 nucleoside-diphosphate sugar oxidoreductase 0.38 BPHYT_RS25955 transcriptional regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_04851 NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC 0.35 H281DRAFT_01736 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR low > 103
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_07240 flaA1 polysaccharide biosynthesis protein 0.36 OKGIIK_04905 DNA-binding response regulator low > 52
Castellaniella sp019104865 MT123 0.26 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase 0.37 ABCV34_RS03230 heavy metal response regulator transcription factor low > 48
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS21110 dTDP-glucose 4,6-dehydratase 0.37 HSERO_RS12420 transcriptional regulator low > 78
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1539 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) 0.35 Ac3H11_4585 DNA-binding heavy metal response regulator low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF1865 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) 0.37 GFF3258 DNA-binding heavy metal response regulator low > 90
Pseudomonas stutzeri RCH2 0.24 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases 0.38 Psest_1185 heavy metal response regulator low > 67
Pseudomonas sp. S08-1 0.23 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM 0.37 OH686_22680 Copper-sensing two-component system response regulator CusR low > 80
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01350 polysaccharide biosynthesis protein 0.36 CSW01_15165 DNA-binding response regulator low > 62
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.2386.1 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) 0.32 Xcc-8004.5008.1 Two-component system regulatory protein — —
Enterobacter asburiae PDN3 0.23 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases 0.40 EX28DRAFT_1165 heavy metal response regulator low > 76
Pseudomonas fluorescens SBW25 0.23 PFLU_RS08190 polysaccharide biosynthesis protein 0.37 PFLU_RS20435 heavy metal response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS08190 polysaccharide biosynthesis protein 0.37 PFLU_RS20435 heavy metal response regulator transcription factor low > 109
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM 0.36 PfGW456L13_4017 Copper-sensing two-component system response regulator CusR low > 87
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_01970 hypothetical protein 0.37 AO353_28575 transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_03345 hypothetical protein 0.36 AO356_26830 transcriptional regulator low > 104
Pseudomonas putida KT2440 0.23 PP_1805 Polysaccharide biosynthesis protein 0.37 PP_1438 response regulator low > 96
Pseudomonas fluorescens FW300-N2E2 0.22 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM 0.35 Pf6N2E2_5366 DNA-binding heavy metal response regulator low > 103
Pseudomonas sp. RS175 0.22 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase 0.36 PFR28_01522 Transcriptional activator protein CzcR low > 88

Not shown: 9 genomes with orthologs for BT0378 only; 53 genomes with orthologs for BT0682 only