Conservation of cofitness between b3292 and b3469 in Escherichia coli BW25113

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3292 zntR zinc-responsive transcriptional regulator (NCBI) 1.0 b3469 zntA zinc, cobalt and lead efflux system (NCBI) 0.65 1
Escherichia coli ECOR38 1.00 HEPCGN_16330 zntR Zn(2+)-responsive transcriptional regulator 0.98 HEPCGN_15505 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA low > 85
Escherichia coli ECRC101 1.00 MCAODC_08030 zntR Zn(2+)-responsive transcriptional regulator 0.99 MCAODC_07205 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECRC99 1.00 KEDOAH_10640 zntR Zn(2+)-responsive transcriptional regulator 0.99 KEDOAH_11465 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECRC101 1.00 OKFHMN_17500 zntR Zn(2+)-responsive transcriptional regulator 0.99 OKFHMN_16675 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECRC62 1.00 BNILDI_02220 zntR Zn(2+)-responsive transcriptional regulator 0.99 BNILDI_03035 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00411 HTH-type transcriptional regulator ZntR 0.99 OHPLBJKB_00234 Zinc/cadmium/lead-transporting P-type ATPase low > 73
Escherichia coli ECRC102 1.00 NIAGMN_15270 zntR Zn(2+)-responsive transcriptional regulator 0.99 NIAGMN_14445 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli ECOR27 1.00 NOLOHH_09300 zntR Zn(2+)-responsive transcriptional regulator 0.99 NOLOHH_08480 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA 0.59 57
Escherichia coli ECRC98 1.00 JDDGAC_21130 zntR Zn(2+)-responsive transcriptional regulator 0.99 JDDGAC_20305 zntA Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Escherichia coli BL21 1.00 ECD_03143 zntA gene transcriptional activator 0.99 ECD_03318 zinc, cobalt and lead efflux system low > 60
Escherichia fergusonii Becca 0.99 EFB2_00531 HTH-type transcriptional regulator ZntR 0.99 EFB2_00347 Zinc/cadmium/lead-transporting P-type ATPase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS18895 Zn(2+)-responsive transcriptional regulator 0.99 ECOLIN_RS19835 Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2387 transcriptional regulator, MerR family 0.82 GFF536 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0035 Zn(II)-responsive transcriptional regulator 0.75 EX28DRAFT_4303 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS25700 heavy metal-responsive transcriptional regulator 0.74 BWI76_RS26425 zinc/cadmium/mercury/lead-transporting ATPase 0.94 1
Enterobacter sp. TBS_079 0.88 MPMX20_04200 HTH-type transcriptional regulator ZntR 0.75 MPMX20_04346 Zinc/cadmium/lead-transporting P-type ATPase 0.75 1
Erwinia tracheiphila SCR3 0.76 LU632_RS22515 zntR Zn(2+)-responsive transcriptional regulator 0.54 LU632_RS19305 zinc/cadmium/mercury/lead-transporting ATPase low > 74
Serratia liquefaciens MT49 0.76 IAI46_23295 Zn(2+)-responsive transcriptional regulator 0.62 IAI46_00855 zinc/cadmium/mercury/lead-transporting ATPase 0.99 1
Pantoea sp. MT58 0.75 IAI47_02260 Zn(2+)-responsive transcriptional regulator 0.55 IAI47_01515 zinc/cadmium/mercury/lead-transporting ATPase low > 76
Rahnella sp. WP5 0.65 EX31_RS16005 Zn(2+)-responsive transcriptional regulator 0.60 EX31_RS14850 zinc/cadmium/mercury/lead-transporting ATPase low > 89
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_01430 Zn(2+)-responsive transcriptional regulator 0.51 CSW01_05250 zinc/cadmium/mercury/lead-transporting ATPase 0.59 3
Variovorax sp. OAS795 0.36 ABID97_RS20720 Cd(II)/Pb(II)-responsive transcriptional regulator 0.25 ABID97_RS20715 heavy metal translocating P-type ATPase 0.87 1
Phaeobacter inhibens DSM 17395 0.35 PGA1_262p00460 transcriptional regulator, MerR family 0.42 PGA1_c29910 lead, cadmium, zinc and mercury-transporting ATPase 0.56 1
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4838 transcriptional regulator, MerR family 0.28 Psyr_4837 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4838 transcriptional regulator, MerR family 0.28 Psyr_4837 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase 0.44 1
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28620 Cd(II)/Pb(II)-responsive transcriptional regulator 0.29 PFLU_RS28615 heavy metal translocating P-type ATPase low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28620 Cd(II)/Pb(II)-responsive transcriptional regulator 0.29 PFLU_RS28615 heavy metal translocating P-type ATPase low > 109
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_958 Cd(II)/Pb(II)-responsive transcriptional regulator 0.28 PfGW456L13_959 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.94 1
Rhodopseudomonas palustris CGA009 0.33 TX73_016860 helix-turn-helix domain-containing protein 0.39 TX73_016855 heavy metal translocating P-type ATPase 0.29 38
Rhizobium sp. OAE497 0.33 ABIE40_RS15545 helix-turn-helix domain-containing protein 0.37 ABIE40_RS15550 heavy metal translocating P-type ATPase low > 107
Pseudomonas putida KT2440 0.32 PP_5140 Transcriptional regulator, MerR family 0.30 PP_5139 cadmium translocating P-type ATPase 0.22 5
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_10375 Cd(II)/Pb(II)-responsive transcriptional regulator 0.27 AO356_10380 ATPase P 0.57 3
Pseudomonas simiae WCS417 0.32 PS417_26960 Cd(II)/Pb(II)-responsive transcriptional regulator 0.28 PS417_26955 ATPase P
Magnetospirillum magneticum AMB-1 0.32 AMB_RS05180 MerR family DNA-binding transcriptional regulator 0.25 AMB_RS05185 heavy metal translocating P-type ATPase low > 64
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3947 Cd(II)/Pb(II)-responsive transcriptional regulator 0.27 Pf6N2E2_3948 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.29 2
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_08425 Cd(II)/Pb(II)-responsive transcriptional regulator 0.29 AO353_08420 ATPase P 0.74 2
Pseudomonas sp. RS175 0.32 PFR28_04825 Mercuric resistance operon regulatory protein 0.27 PFR28_04824 Cadmium-transporting ATPase low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2290 Cd(II)/Pb(II)-responsive transcriptional regulator 0.28 Pf1N1B4_2291 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.36 1
Bosea sp. OAE506 0.31 ABIE41_RS05340 helix-turn-helix domain-containing protein 0.35 ABIE41_RS14225 heavy metal translocating P-type ATPase
Dickeya dadantii 3937 0.31 DDA3937_RS02550 Cd(II)/Pb(II)-responsive transcriptional regulator 0.28 DDA3937_RS02545 heavy metal translocating P-type ATPase 0.61 1
Azospirillum sp. SherDot2 0.31 MPMX19_06703 HTH-type transcriptional regulator HmrR 0.35 MPMX19_06375 Zinc/cadmium/lead-transporting P-type ATPase low > 112
Dickeya dianthicola ME23 0.30 DZA65_RS02685 Cd(II)/Pb(II)-responsive transcriptional regulator 0.27 DZA65_RS02680 heavy metal translocating P-type ATPase low > 75
Dickeya dianthicola 67-19 0.30 HGI48_RS02580 Cd(II)/Pb(II)-responsive transcriptional regulator 0.28 HGI48_RS02575 heavy metal translocating P-type ATPase 0.50 16

Not shown: 15 genomes with orthologs for b3292 only; 17 genomes with orthologs for b3469 only