Conservation of cofitness between b0968 and b2819 in Escherichia coli BW25113

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0968 yccX predicted acylphosphatase (NCBI) 1.0 b2819 recD exonuclease V (RecBCD complex), alpha chain (NCBI) 0.17 5
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02698 Acylphosphatase 1.00 OHPLBJKB_00911 RecBCD enzyme subunit RecD low > 73
Escherichia coli ECRC101 1.00 OKFHMN_05180 yccX acylphosphatase 0.99 OKFHMN_20055 recD exodeoxyribonuclease V subunit alpha — —
Escherichia coli ECRC101 1.00 MCAODC_24570 yccX acylphosphatase 0.99 MCAODC_10580 recD exodeoxyribonuclease V subunit alpha — —
Escherichia coli BL21 1.00 ECD_00972 weak acylphosphatase 1.00 ECD_02667 exonuclease V (RecBCD complex), alpha chain — —
Escherichia coli ECRC99 1.00 KEDOAH_22555 yccX acylphosphatase 0.99 KEDOAH_08075 recD exodeoxyribonuclease V subunit alpha — —
Escherichia coli ECRC98 1.00 JDDGAC_08790 yccX acylphosphatase 0.99 JDDGAC_23720 recD exodeoxyribonuclease V subunit alpha — —
Escherichia coli ECRC102 1.00 NIAGMN_02900 yccX acylphosphatase 0.99 NIAGMN_17825 recD exodeoxyribonuclease V subunit alpha — —
Escherichia coli ECOR38 0.99 HEPCGN_23340 yccX acylphosphatase 0.98 HEPCGN_19310 recD exodeoxyribonuclease V subunit alpha — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS05090 acylphosphatase 0.99 ECOLIN_RS15825 exodeoxyribonuclease V subunit alpha — —
Escherichia coli ECRC62 0.98 BNILDI_19900 yccX acylphosphatase 1.00 BNILDI_10420 recD exodeoxyribonuclease V subunit alpha — —
Escherichia fergusonii Becca 0.98 EFB2_03103 Acylphosphatase 0.99 EFB2_01065 RecBCD enzyme subunit RecD low > 86
Escherichia coli ECOR27 0.96 NOLOHH_21735 yccX acylphosphatase 1.00 NOLOHH_11940 recD exodeoxyribonuclease V subunit alpha — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF3261 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative 0.82 GFF1300 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) — —
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1973 Acylphosphatases 0.70 EX28DRAFT_2894 DNA helicase/exodeoxyribonuclease V, alpha subunit (EC 3.1.11.5) low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_01620 Acylphosphatase 0.69 MPMX20_03682 RecBCD enzyme subunit RecD low > 85
Klebsiella michiganensis M5al 0.73 BWI76_RS10060 acylphosphatase 0.69 BWI76_RS23225 exonuclease V subunit alpha low > 92
Serratia liquefaciens MT49 0.68 IAI46_08935 acylphosphatase 0.53 IAI46_20400 exodeoxyribonuclease V subunit alpha — —
Rahnella sp. WP5 0.66 EX31_RS17985 acylphosphatase 0.30 EX31_RS20730 exodeoxyribonuclease V subunit alpha low > 89
Pantoea sp. MT58 0.65 IAI47_12590 acylphosphatase 0.52 IAI47_03970 exodeoxyribonuclease V subunit alpha low > 76
Dickeya dianthicola ME23 0.64 DZA65_RS16095 acylphosphatase 0.29 DZA65_RS11475 exodeoxyribonuclease V subunit alpha — —
Dickeya dadantii 3937 0.63 DDA3937_RS15195 acylphosphatase 0.29 DDA3937_RS11075 exodeoxyribonuclease V subunit alpha — —
Dickeya dianthicola 67-19 0.63 HGI48_RS15270 acylphosphatase 0.29 HGI48_RS11095 exodeoxyribonuclease V subunit alpha — —
Pectobacterium carotovorum WPP14 0.62 HER17_RS08470 acylphosphatase 0.51 HER17_RS16520 exodeoxyribonuclease V subunit alpha low > 75
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_06825 acylphosphatase 0.40 CSW01_11775 exodeoxyribonuclease V subunit alpha low > 62
Marinobacter adhaerens HP15 0.41 HP15_1557 acylphosphatase 0.30 HP15_3712 exonuclease V subunit alpha — —
Mycobacterium tuberculosis H37Rv 0.35 Rv2922A Probable acylphosphatase AcyP (acylphosphate phosphohydrolase) 0.19 Rv0629c Probable exonuclease V (alpha chain) RecD (exodeoxyribonuclease V alpha chain) (exodeoxyribonuclease V polypeptide) — —
Pseudomonas sp. S08-1 0.35 OH686_19060 Acylphosphate phosphohydrolase 0.31 OH686_12070 exodeoxyribonuclease V, alpha subunit — —
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS03730 acylphosphatase 0.19 LRK54_RS02185 exodeoxyribonuclease V subunit alpha low > 59
Rhodanobacter denitrificans MT42 0.33 LRK55_RS03480 acylphosphatase 0.19 LRK55_RS01935 exodeoxyribonuclease V subunit alpha — —
Shewanella loihica PV-4 0.33 Shew_1628 acylphosphatase (RefSeq) 0.32 Shew_2131 exodeoxyribonuclease V, alpha subunit (RefSeq) — —
Shewanella oneidensis MR-1 0.32 SO2253 acylphosphatase (NCBI ptt file) 0.29 SO2147 recD exodeoxyribonuclease V, alpha subunit (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.32 Sama_1328 acylphosphatase (RefSeq) 0.33 Sama_1902 exodeoxyribonuclease V (RefSeq) — —
Shewanella sp. ANA-3 0.31 Shewana3_2291 acylphosphatase (RefSeq) 0.31 Shewana3_2247 exodeoxyribonuclease V, alpha subunit (RefSeq) — —

Not shown: 12 genomes with orthologs for b0968 only; 21 genomes with orthologs for b2819 only