Conservation of cofitness between b0307 and b1526 in Escherichia coli BW25113

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0307 ykgF predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain (NCBI) 1.0 b1526 yneJ predicted DNA-binding transcriptional regulator (NCBI) 0.17 7
Escherichia coli BL21 1.00 ECD_00263 ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component 1.00 ECD_01483 putative DNA-binding transcriptional regulator — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02005 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.99 ECOLIN_RS08715 LysR family transcriptional regulator — —
Escherichia coli ECRC102 1.00 NIAGMN_07165 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.98 NIAGMN_25250 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC99 1.00 KEDOAH_18865 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.98 KEDOAH_27325 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC101 1.00 OKFHMN_09100 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.98 OKFHMN_01105 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC98 1.00 JDDGAC_12750 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.98 JDDGAC_03615 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli ECRC101 1.00 MCAODC_28325 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.98 MCAODC_16820 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia fergusonii Becca 0.99 EFB2_03733 Lactate utilization protein B 0.99 EFB2_02434 HTH-type transcriptional regulator GltR low > 86
Escherichia coli ECRC62 0.99 BNILDI_00040 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.99 BNILDI_17235 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03375 Lactate utilization protein B 1.00 OHPLBJKB_02193 HTH-type transcriptional regulator GltR low > 73
Escherichia coli ECOR27 0.99 NOLOHH_01915 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein 0.98 NOLOHH_18755 yneJ Uncharacterized HTH-type transcriptional regulator YneJ — —
Dickeya dadantii 3937 0.86 DDA3937_RS12260 iron-sulfur cluster-binding protein 0.47 DDA3937_RS09330 LysR family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS12350 iron-sulfur cluster-binding protein 0.47 HGI48_RS09355 LysR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS12790 iron-sulfur cluster-binding protein 0.47 DZA65_RS09660 LysR family transcriptional regulator low > 75
Dechlorosoma suillum PS 0.40 Dsui_0126 (4Fe-4S) cluster-containing protein 0.40 Dsui_1858 transcriptional regulator low > 51
Ralstonia solanacearum PSI07 0.39 RPSI07_RS15880 iron-sulfur cluster-binding protein 0.32 RPSI07_RS19975 LysR family transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.39 RS_RS08115 iron-sulfur cluster-binding protein 0.34 RS_RS01060 LysR family transcriptional regulator low > 80
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS07435 (Fe-S)-binding protein 0.33 RR42_RS15135 LysR family transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS01605 iron-sulfur cluster-binding protein 0.33 RALBFv3_RS13245 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.39 UW163_RS14915 iron-sulfur cluster-binding protein 0.33 UW163_RS00325 LysR family transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS13405 LutB/LldF family L-lactate oxidation iron-sulfur protein 0.33 ABZR87_RS09325 LysR family transcriptional regulator low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_05710 (Fe-S)-binding protein 0.48 AO353_18385 LysR family transcriptional regulator low > 101
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00473 iron-sulfur cluster-binding protein 0.35 H281DRAFT_04446 transcriptional regulator, LysR family low > 103
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_5116 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF 0.65 PfGW456L13_3879 LysR family transcriptional regulator YneJ low > 87
Paraburkholderia graminis OAS925 0.36 ABIE53_002786 L-lactate dehydrogenase complex protein LldF 0.34 ABIE53_002962 DNA-binding transcriptional LysR family regulator low > 113
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_07560 (Fe-S)-binding protein 0.48 AO356_04115 LysR family transcriptional regulator low > 104
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS05760 lactate utilization protein B 0.35 QEN71_RS04990 LysR family transcriptional regulator low > 153
Pseudomonas sp. RS175 0.35 PFR28_00061 Lactate utilization protein B 0.49 PFR28_00773 HTH-type transcriptional regulator GltR low > 88
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_1188 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF 0.48 Pf1N1B4_532 Transcriptional regulators, LysR family low > 87
Rhodospirillum rubrum S1H 0.35 Rru_A3605 Iron-sulfur cluster binding protein (NCBI) 0.31 Rru_A1652 Transcriptional Regulator, LysR family (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS12805 hypothetical protein 0.35 BPHYT_RS13975 LysR family transcriptional regulator low > 109
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS18400 iron-sulfur cluster-binding protein 0.23 CA265_RS04875 LysR family transcriptional regulator low > 88
Azospirillum sp. SherDot2 0.34 MPMX19_06094 Lactate utilization protein B 0.28 MPMX19_02320 HTH-type transcriptional regulator GltR low > 112
Magnetospirillum magneticum AMB-1 0.31 AMB_RS20890 iron-sulfur cluster-binding protein 0.26 AMB_RS11465 transcriptional regulator — —

Not shown: 18 genomes with orthologs for b0307 only; 21 genomes with orthologs for b1526 only