Conservation of cofitness between b0312 and b1525 in Escherichia coli BW25113

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0312 betB betaine aldehyde dehydrogenase, NAD-dependent (NCBI) 1.0 b1525 b1525 putative aldehyde dehydrogenase (VIMSS) 0.19 10
Escherichia coli BL21 0.99 ECD_00268 betaine aldehyde dehydrogenase, NAD-dependent 1.00 ECD_01482 succinate semialdehyde dehydrogenase, NAD(P)+-dependent low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03363 NAD/NADP-dependent betaine aldehyde dehydrogenase 1.00 OHPLBJKB_02194 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 73
Escherichia coli ECRC102 0.99 NIAGMN_07100 betB betaine-aldehyde dehydrogenase 1.00 NIAGMN_25255 sad succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC101 0.99 OKFHMN_09045 betB betaine-aldehyde dehydrogenase 1.00 OKFHMN_01110 sad succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC98 0.99 JDDGAC_12695 betB betaine-aldehyde dehydrogenase 1.00 JDDGAC_03620 sad succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC99 0.99 KEDOAH_18920 betB betaine-aldehyde dehydrogenase 1.00 KEDOAH_27320 sad succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC101 0.99 MCAODC_28270 betB betaine-aldehyde dehydrogenase 1.00 MCAODC_16815 sad succinate-semialdehyde dehydrogenase — —
Escherichia coli ECOR27 0.99 NOLOHH_01895 betB betaine-aldehyde dehydrogenase 0.99 NOLOHH_18760 sad succinate-semialdehyde dehydrogenase low > 57
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02055 betaine-aldehyde dehydrogenase 0.99 ECOLIN_RS08710 succinate-semialdehyde dehydrogenase — —
Escherichia coli ECRC62 0.99 BNILDI_00020 betB betaine-aldehyde dehydrogenase 1.00 BNILDI_17240 sad succinate-semialdehyde dehydrogenase — —
Escherichia coli ECOR38 0.99 HEPCGN_07605 betB betaine-aldehyde dehydrogenase 0.99 HEPCGN_26650 sad succinate-semialdehyde dehydrogenase low > 85
Escherichia fergusonii Becca 0.99 EFB2_03723 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.99 EFB2_02435 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 86
Enterobacter sp. TBS_079 0.93 MPMX20_01229 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.78 MPMX20_02269 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2387 betaine-aldehyde dehydrogenase 0.78 EX28DRAFT_1198 NAD-dependent aldehyde dehydrogenases low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS07615 betaine-aldehyde dehydrogenase 0.79 BWI76_RS15205 succinate-semialdehyde dehydrogenase low > 92
Pantoea sp. MT58 0.82 IAI47_08650 betaine-aldehyde dehydrogenase 0.62 IAI47_21330 aldehyde dehydrogenase family protein low > 76
Pseudomonas simiae WCS417 0.79 PS417_26340 betaine-aldehyde dehydrogenase 0.65 PS417_18705 succinate dehydrogenase low > 88
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS27990 betaine-aldehyde dehydrogenase 0.67 PFLU_RS20675 aldehyde dehydrogenase family protein low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS27990 betaine-aldehyde dehydrogenase 0.67 PFLU_RS20675 aldehyde dehydrogenase family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_2417 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.66 Pf1N1B4_5616 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 87
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_1083 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.66 PfGW456L13_3880 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 87
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_4733 betaine aldehyde dehydrogenase 0.64 Psyr_2394 succinate semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_4733 betaine aldehyde dehydrogenase 0.64 Psyr_2394 succinate semialdehyde dehydrogenase low > 86
Pseudomonas putida KT2440 0.75 PP_5063 betaine aldehyde dehydrogenase, NAD-dependent 0.66 PP_3151 NAD+-dependent succinate semialdehyde dehydrogenase low > 96
Acinetobacter radioresistens SK82 0.75 MPMX26_02369 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.36 MPMX26_00106 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad — —
Rahnella sp. WP5 0.74 EX31_RS18820 betaine-aldehyde dehydrogenase 0.67 EX31_RS00180 aldehyde dehydrogenase family protein low > 89
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_02464 betaine aldehyde dehydrogenase 0.55 H281DRAFT_00057 succinate semialdehyde dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.69 ABIE53_006148 betaine-aldehyde dehydrogenase 0.57 ABIE53_001753 succinate-semialdehyde dehydrogenase low > 113
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS08175 betaine-aldehyde dehydrogenase 0.34 QEN71_RS38495 NAD-dependent succinate-semialdehyde dehydrogenase low > 153
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.965.1 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.45 Xcc-8004.2214.1 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 74
Alteromonas macleodii MIT1002 0.59 MIT1002_02908 Betaine aldehyde dehydrogenase 0.43 MIT1002_03989 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 70
Phaeobacter inhibens DSM 17395 0.51 PGA1_c21670 betaine aldehyde dehydrogenase BetB 0.40 PGA1_262p00540 succinate-semialdehyde dehdyrogenase GabD low > 62
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS08900 aldehyde dehydrogenase 0.34 ABZR86_RS04460 NAD-dependent succinate-semialdehyde dehydrogenase low > 74
Mycobacterium tuberculosis H37Rv 0.30 Rv0223c Probable aldehyde dehydrogenase 0.39 Rv0234c Succinate-semialdehyde dehydrogenase [NADP+] dependent (SSDH) GabD1 low > 58

Not shown: 17 genomes with orthologs for b0312 only; 10 genomes with orthologs for b1525 only