Homologs of rbp2 from Synechococcus elongatus PCC 7942

rbp2: RNA-binding region RNP-1
SEED: RNA-binding protein

47 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Synechococcus elongatus PCC 7942 Synpcc7942_1999 rbp2 RNA-binding region RNP-1 strong 100 100
  Synechococcus elongatus PCC 7942 Synpcc7942_0679 rbp1 RNA-binding region RNP-1 strong 65 86
o Bacteroides stercoris CC31F HMPREF1181_RS07465 RNA-binding protein strong 57 83
o Phocaeicola dorei CL03T12C01 ABI39_RS02340 RNA-binding protein no data 49 85
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03095 RNA-binding protein insig. 49 85
o Bacteroides ovatus ATCC 8483 BACOVA_00333 hypothetical protein strong 54 84
o Bacteroides thetaiotaomicron VPI-5482 BT3840 putative RNA-binding protein rbpA (NCBI ptt file) strong 54 84
  Bacteroides ovatus ATCC 8483 BACOVA_02523 hypothetical protein insig. 51 85
o Desulfovibrio vulgaris Hildenborough JW710 DVU2215 RNA-binding protein (TIGR) no data 55 86
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17060 RNA-binding protein insig. 49 84
  Bacteroides thetaiotaomicron VPI-5482 BT0784 putative RNA-binding protein (NCBI ptt file) no data 49 85
  Phocaeicola dorei CL03T12C01 ABI39_RS02830 RNA-binding protein insig. 48 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU1257 RNA-binding protein (TIGR) cofit 52 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08600 RNA-binding protein insig. 47 85
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02075 RNA-binding protein insig. 46 85
  Bacteroides stercoris CC31F HMPREF1181_RS03710 RNA-binding protein insig. 43 99
o Desulfovibrio vulgaris Miyazaki F DvMF_2964 RNP-1 like RNA-binding protein (RefSeq) sig. 55 88
  Desulfovibrio vulgaris Miyazaki F DvMF_0050 RNP-1 like RNA-binding protein (RefSeq) no data 46 88
  Desulfovibrio vulgaris Miyazaki F DvMF_0195 RNP-1 like RNA-binding protein (RefSeq) strong 47 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00575 RNA-binding protein insig. 46 84
  Phocaeicola dorei CL03T12C01 ABI39_RS16930 RNA-binding protein insig. 46 84
  Bacteroides thetaiotaomicron VPI-5482 BT1887 putative RNA-binding protein rbpA (NCBI ptt file) no data 46 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU2430 RNA-binding protein (TIGR) insig. 55 79
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04275 RNA-binding protein insig. 46 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2446 RNA-binding protein cofit 42 87
  Bacteroides ovatus ATCC 8483 BACOVA_01523 hypothetical protein insig. 45 87
  Shewanella loihica PV-4 Shew_0140 RNP-1-like RNA-binding protein (RefSeq) sig. 46 88
  Shewanella amazonensis SB2B Sama_0195 RNA-binding protein (RefSeq) sig. 45 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19520 RNA-binding protein no data 42 91
  Acidovorax sp. GW101-3H11 Ac3H11_870 RNA-binding protein insig. 43 95
  Variovorax sp. SCN45 GFF5019 RNA-binding protein insig. 40 87
  Acidovorax sp. GW101-3H11 Ac3H11_4275 RNA-binding protein no data 40 87
  Acidovorax sp. GW101-3H11 Ac3H11_4274 RNA-binding protein strong 39 87
  Variovorax sp. OAS795 ABID97_RS02610 RNA-binding protein strong 39 87
  Variovorax sp. OAS795 ABID97_RS04115 RNA-binding protein strong 39 87
  Variovorax sp. SCN45 GFF3267 RNA-binding protein insig. 39 87
  Shewanella sp. ANA-3 Shewana3_0181 RNP-1-like RNA-binding protein (RefSeq) strong 41 95
  Shewanella oneidensis MR-1 SO0208 RNA-binding protein (NCBI ptt file) strong 41 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12475 RNA-binding protein no data 40 81
  Phocaeicola dorei CL03T12C01 ABI39_RS04260 RNA-binding protein sig. 40 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_00805 RNA-binding protein insig. 42 89
o Kangiella aquimarina DSM 16071 B158DRAFT_1130 RNA-binding proteins (RRM domain) insig. 38 86
  Synechococcus elongatus PCC 7942 Synpcc7942_0790 rbp3 RNA-binding region RNP-1 strong 38 100
  Alteromonas macleodii MIT1002 MIT1002_03368 splicing factor, CC1-like family insig. 38 86
  Acinetobacter radioresistens SK82 MPMX26_00370 hypothetical protein insig. 37 84
  Alteromonas macleodii MIT1002 MIT1002_03076 polyadenylate binding protein, human types 1, 2, 3, 4 family insig. 32 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06140 RNA-binding protein sig. 28 78