Homologs of BT0978 from Bacteroides thetaiotaomicron VPI-5482

ECF-type sigma factor (NCBI ptt file)
SEED: ECF-type sigma factor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bacteroides thetaiotaomicron VPI-5482 BT0978 ECF-type sigma factor (NCBI ptt file) sig. 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_00784 Sigma-70 region 2 insig. 93 100
o Phocaeicola dorei CL03T12C01 ABI39_RS14645 sigma-70 family RNA polymerase sigma factor strong 74 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18335 sigma-70 family RNA polymerase sigma factor strong 74 100
  Bacteroides thetaiotaomicron VPI-5482 BT4636 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 40 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11885 sigma-70 family RNA polymerase sigma factor insig. 39 98
  Bacteroides thetaiotaomicron VPI-5482 BT3517 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 40 98
  Bacteroides ovatus ATCC 8483 BACOVA_03337 RNA polymerase sigma factor, sigma-70 family insig. 37 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0837 RNA polymerase sigma factor, sigma-70 family insig. 33 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13615 RNA polymerase sigma factor insig. 34 96
  Phocaeicola dorei CL03T12C01 ABI39_RS21180 sigma-70 family RNA polymerase sigma factor insig. 35 97
  Bacteroides ovatus ATCC 8483 BACOVA_01604 Sigma-70 region 2 insig. 40 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12555 sigma-70 family RNA polymerase sigma factor insig. 32 94
  Bacteroides ovatus ATCC 8483 BACOVA_00436 sigma-70, region 4 insig. 36 99
  Bacteroides ovatus ATCC 8483 BACOVA_00619 RNA polymerase sigma factor, sigma-70 family insig. 32 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03970 hypothetical protein insig. 33 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2161 RNA polymerase sigma factor, sigma-70 family insig. 29 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02650 RNA polymerase sigma factor insig. 29 96
  Bacteroides thetaiotaomicron VPI-5482 BT1728 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 96
  Bacteroides ovatus ATCC 8483 BACOVA_04457 RNA polymerase sigma factor, sigma-70 family insig. 27 96
  Bacteroides ovatus ATCC 8483 BACOVA_01132 sigma-70, region 4 insig. 33 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09115 hypothetical protein strong 30 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2655 RNA polymerase sigma factor, sigma-70 family insig. 28 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11845 hypothetical protein insig. 28 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3782 RNA polymerase sigma factor, sigma-70 family insig. 33 98
  Bacteroides ovatus ATCC 8483 BACOVA_02037 RNA polymerase sigma-70 factor insig. 25 97
  Burkholderia phytofirmans PsJN BPHYT_RS22710 XRE family transcriptional regulator sig. 27 98
  Marinobacter adhaerens HP15 HP15_342 RNA polymerase sigma factor SigE insig. 25 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2176 RNA polymerase sigma factor, sigma-70 family insig. 27 98
o Synechococcus elongatus PCC 7942 Synpcc7942_2004 sigI RNA polymerase sigma factor insig. 27 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08105 RNA polymerase sigma factor insig. 27 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1322 RNA polymerase sigma factor, sigma-70 family sig. 28 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00160 hypothetical protein insig. 28 98
  Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 26 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 25 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09175 RNA polymerase sigma factor sig. 27 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2584 RNA polymerase sigma factor, sigma-70 family insig. 26 96
  Bacteroides ovatus ATCC 8483 BACOVA_02944 RNA polymerase sigma-70 factor insig. 27 96
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 27 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09605 RNA polymerase sigma-70 factor insig. 27 96
  Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 28 98
  Enterobacter asburiae PDN3 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family cofit 24 96
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 23 96
  Variovorax sp. OAS795 ABID97_RS08165 sigma-70 family RNA polymerase sigma factor insig. 25 97
  Bacteroides ovatus ATCC 8483 BACOVA_00923 RNA polymerase sigma-70 factor insig. 24 97
  Phocaeicola dorei CL03T12C01 ABI39_RS03560 RNA polymerase sigma factor insig. 26 97
  Bacteroides ovatus ATCC 8483 BACOVA_00098 RNA polymerase sigma-70 factor insig. 27 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3996 RNA polymerase sigma factor, sigma-70 family insig. 30 98
  Bacteroides thetaiotaomicron VPI-5482 BT3396 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 24 90
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 25 98
  Bacteroides ovatus ATCC 8483 BACOVA_01977 RNA polymerase sigma-70 factor insig. 26 98
  Burkholderia phytofirmans PsJN BPHYT_RS21845 hypothetical protein insig. 27 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14710 hypothetical protein insig. 23 98
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 26 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 25 98
  Sinorhizobium meliloti 1021 SM_b20531 RNA polymerase sigma factor insig. 24 79
  Bacteroides ovatus ATCC 8483 BACOVA_02727 RNA polymerase sigma-70 factor insig. 26 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21720 RNA polymerase subunit sigma-70 insig. 24 96
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 23 98
  Kangiella aquimarina DSM 16071 B158DRAFT_0139 RNA polymerase sigma factor, sigma-70 family insig. 25 100
  Rhodopseudomonas palustris CGA009 TX73_009325 sigma-70 family RNA polymerase sigma factor insig. 27 79
  Bacteroides ovatus ATCC 8483 BACOVA_01909 Sigma-70 region 2 sig. 23 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11895 hypothetical protein insig. 28 90
  Bacteroides thetaiotaomicron VPI-5482 BT4070 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 27 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13700 hypothetical protein insig. 26 98
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 25 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10380 RNA polymerase subunit sigma-70 insig. 25 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS05370 RNA polymerase subunit sigma-70 insig. 25 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1926 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 24 98
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 24 98
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 26 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor sig. 22 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07135 RNA polymerase sigma factor insig. 21 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06415 RNA polymerase sigma factor insig. 27 96
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 30 80
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3125 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 26 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3924 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 25 98
  Bacteroides thetaiotaomicron VPI-5482 BT2169 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 24 99
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 25 91
  Bacteroides ovatus ATCC 8483 BACOVA_01682 RNA polymerase sigma-70 factor insig. 26 96
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 24 97
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 22 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21220 hypothetical protein insig. 26 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12140 hypothetical protein insig. 26 97
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 24 98
  Bacteroides ovatus ATCC 8483 BACOVA_00284 RNA polymerase sigma-70 factor insig. 24 97
  Bacteroides ovatus ATCC 8483 BACOVA_04380 Sigma-70 region 2 insig. 24 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 21 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03205 RNA polymerase sigma factor no data 27 99
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 31 72
  Phocaeicola dorei CL03T12C01 ABI39_RS10065 sigma-70 family RNA polymerase sigma factor insig. 27 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14445 sigma-70 family RNA polymerase sigma factor insig. 27 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 26 84
  Variovorax sp. SCN45 GFF5806 RNA polymerase ECF-type sigma factor insig. 25 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06675 RNA polymerase sigma-70 factor insig. 24 99
  Sinorhizobium meliloti 1021 SMc01506 RNA polymerase sigma factor strong 26 80
  Variovorax sp. SCN45 GFF3817 RNA polymerase sigma factor insig. 23 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4566 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 23 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2852 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 32 44
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01435 RNA polymerase sigma factor insig. 25 98