Conservation of cofitness between Xcc-8004.5365.1 and Xcc-8004.2957.1 in Xanthomonas campestris pv. campestris strain 8004

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.5365.1 Uncharacterized ABC transporter, permease component YrbE 1.0 Xcc-8004.2957.1 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) 0.53 15
Lysobacter sp. OAE881 0.78 ABIE51_RS01010 MlaE family lipid ABC transporter permease subunit 0.52 ABIE51_RS17520 bifunctional aspartate kinase/homoserine dehydrogenase I low > 62
Pantoea sp. MT58 0.48 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 IAI47_16215 bifunctional aspartate kinase/homoserine dehydrogenase I low > 76
Escherichia coli ECRC100 0.47 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 OKFHMN_11110 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 80
Escherichia coli ECRC102 0.47 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 NIAGMN_08960 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Dickeya dianthicola ME23 0.47 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 DZA65_RS19485 bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 HGI48_RS18345 bifunctional aspartate kinase/homoserine dehydrogenase I low > 71
Escherichia coli BW25113 0.47 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) 0.33 b0002 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) low > 76
Escherichia coli Nissle 1917 0.47 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 ECOLIN_RS00010 bifunctional aspartate kinase/homoserine dehydrogenase I low > 55
Escherichia coli ECOR27 0.47 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 NOLOHH_03440 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Escherichia coli ECOR38 0.47 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 HEPCGN_09115 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 87
Escherichia coli ECRC101 0.47 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 MCAODC_01625 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 87
Escherichia fergusonii Becca 0.47 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE 0.33 EFB2_04041 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 86
Escherichia coli BL21 0.47 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein 0.33 ECD_00002 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 61
Escherichia coli ECRC62 0.47 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 BNILDI_08160 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Escherichia coli ECRC98 0.47 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 JDDGAC_14705 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE 0.33 OHPLBJKB_03658 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 73
Escherichia coli ECRC99 0.47 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 KEDOAH_17045 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF2938 Uncharacterized ABC transporter, permease component YrbE 0.32 GFF1078 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) 0.37 51
Enterobacter sp. TBS_079 0.47 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE 0.32 MPMX20_00710 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3248 ABC transport permease subunit 0.32 EX28DRAFT_3614 aspartate kinase (EC 2.7.2.4) low > 76
Erwinia tracheiphila SCR3 0.46 LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 LU632_RS02610 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 74
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_12770 ABC transporter permease 0.31 CSW01_11975 bifunctional aspartate kinase/homoserine dehydrogenase I low > 62
Klebsiella michiganensis M5al 0.46 BWI76_RS25225 ABC transporter permease 0.33 BWI76_RS04245 bifunctional aspartate kinase/homoserine dehydrogenase I low > 92
Serratia liquefaciens MT49 0.46 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 IAI46_03030 bifunctional aspartate kinase/homoserine dehydrogenase I low > 86
Rahnella sp. WP5 0.45 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.34 EX31_RS03945 bifunctional aspartate kinase/homoserine dehydrogenase I 0.74 5
Dickeya dadantii 3937 0.45 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 DDA3937_RS18415 bifunctional aspartate kinase/homoserine dehydrogenase I low > 74
Pectobacterium carotovorum WPP14 0.45 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.33 HER17_RS02795 bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Shewanella loihica PV-4 0.44 Shew_3303 hypothetical protein (RefSeq) 0.31 Shew_1079 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) low > 60
Shewanella oneidensis MR-1 0.44 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) 0.31 SO3415 thrA aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.43 Shewana3_0679 hypothetical protein (RefSeq) 0.31 Shewana3_1139 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) low > 73
Shewanella amazonensis SB2B 0.43 Sama_3080 hypothetical protein (RefSeq) 0.29 Sama_0905 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.43 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE 0.33 MIT1002_03086 Aspartokinase I/homoserine dehydrogenase I low > 70
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS04925 ABC transporter permease 0.34 ABZR88_RS18950 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_4045 ABC-type transport system involved in resistance to organic solvents, permease component 0.36 Echvi_2000 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) — —
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS16015 ABC transporter permease 0.34 CA265_RS23475 aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) low > 88

Not shown: 48 genomes with orthologs for Xcc-8004.5365.1 only; 7 genomes with orthologs for Xcc-8004.2957.1 only