Conservation of cofitness between TX73_019540 and TX73_012020 in Rhodopseudomonas palustris CGA009

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_019540 FAD-dependent oxidoreductase 1.0 TX73_012020 NAD-dependent succinate-semialdehyde dehydrogenase 0.55 9
Sinorhizobium meliloti 1021 0.53 SMc00797 oxidoreductase 0.64 SMc02780 succinate-semialdehyde dehydrogenase [NADP+] protein low > 103
Bosea sp. OAE506 0.51 ABIE41_RS13575 FAD-binding oxidoreductase 0.72 ABIE41_RS20985 NAD-dependent succinate-semialdehyde dehydrogenase low > 77
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS10270 D-amino acid dehydrogenase 0.60 BPHYT_RS34305 succinate-semialdehyde dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS12475 FAD-binding oxidoreductase 0.62 QEN71_RS12060 NAD-dependent succinate-semialdehyde dehydrogenase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF267 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.58 GFF1556 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 90
Shewanella loihica PV-4 0.24 Shew_2360 D-hydroxyproline dehydrogenase (from data) 0.54 Shew_3173 succinic semialdehyde dehydrogenase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.23 Sama_1533 D-amino-acid dehydrogenase (RefSeq) 0.59 Sama_2637 succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq) low > 62
Agrobacterium fabrum C58 0.20 Atu3364 D-amino acid dehydrogenase 0.62 Atu4247 aldehyde dehydrogenase low > 89
Rhodospirillum rubrum S1H 0.19 Rru_A2064 FAD dependent oxidoreductase (NCBI) 0.58 Rru_A0134 Succinic semialdehyde dehydrogenase (NCBI) low > 58
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_04065 D-amino acid dehydrogenase small subunit 0.56 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase low > 62
Variovorax sp. OAS795 0.16 ABID97_RS22385 D-amino acid dehydrogenase 0.59 ABID97_RS11235 NAD-dependent succinate-semialdehyde dehydrogenase low > 91
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS08770 D-amino acid dehydrogenase 0.46 A4249_RS14760 NAD-dependent succinate-semialdehyde dehydrogenase low > 48
Pectobacterium carotovorum WPP14 0.15 HER17_RS11170 D-amino acid dehydrogenase 0.61 HER17_RS09885 NAD-dependent succinate-semialdehyde dehydrogenase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.14 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.63 GFF1566 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 78
Rahnella sp. WP5 0.14 EX31_RS10485 D-amino acid dehydrogenase 0.55 EX31_RS12300 NAD-dependent succinate-semialdehyde dehydrogenase low > 89
Dickeya dianthicola 67-19 0.14 HGI48_RS11195 D-amino acid dehydrogenase 0.59 HGI48_RS11855 NAD-dependent succinate-semialdehyde dehydrogenase low > 71
Dickeya dadantii 3937 0.14 DDA3937_RS11170 D-amino acid dehydrogenase 0.33 DDA3937_RS07560 aminobutyraldehyde dehydrogenase low > 74
Dickeya dianthicola ME23 0.14 DZA65_RS11540 D-amino acid dehydrogenase 0.59 DZA65_RS12400 NAD-dependent succinate-semialdehyde dehydrogenase low > 75
Enterobacter asburiae PDN3 0.13 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) 0.53 EX28DRAFT_3290 succinate-semialdehyde dehydrogenase low > 76
Escherichia coli ECOR38 0.13 HEPCGN_24750 dadA D-amino acid dehydrogenase 0.64 HEPCGN_20150 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC101 0.13 MCAODC_21880 dadA D-amino acid dehydrogenase 0.64 MCAODC_11435 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 87
Escherichia coli BW25113 0.13 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) 0.64 b2661 gabD succinate-semialdehyde dehydrogenase I, NADP-dependent (NCBI) low > 76
Escherichia coli ECRC62 0.13 BNILDI_18890 dadA D-amino acid dehydrogenase 0.64 BNILDI_11300 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 75
Escherichia coli ECRC99 0.13 KEDOAH_25305 dadA D-amino acid dehydrogenase 0.64 KEDOAH_07225 gabD NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia fergusonii Becca 0.13 EFB2_02743 D-amino acid dehydrogenase 0.62 EFB2_01269 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD low > 86
Escherichia coli ECRC100 0.13 OKFHMN_28290 dadA D-amino acid dehydrogenase 0.64 OKFHMN_20915 gabD NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia coli ECOR27 0.13 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.64 NOLOHH_12740 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 75
Escherichia coli ECRC98 0.13 JDDGAC_06220 dadA D-amino acid dehydrogenase 0.64 JDDGAC_24575 gabD NADP-dependent succinate-semialdehyde dehydrogenase — —
Pantoea sp. MT58 0.13 IAI47_08890 D-amino acid dehydrogenase 0.54 IAI47_02490 NAD-dependent succinate-semialdehyde dehydrogenase low > 76
Escherichia coli ECRC102 0.13 NIAGMN_27930 dadA D-amino acid dehydrogenase 0.64 NIAGMN_18680 gabD NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia coli Nissle 1917 0.13 ECOLIN_RS07185 D-amino acid dehydrogenase 0.62 ECOLIN_RS14840 NADP-dependent succinate-semialdehyde dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_02500 D-amino acid dehydrogenase 0.63 OHPLBJKB_01071 Succinate-semialdehyde dehydrogenase [NADP(+)] GabD low > 73
Escherichia coli BL21 0.13 ECD_01164 D-amino acid dehydrogenase 0.63 ECD_02517 succinate-semialdehyde dehydrogenase I, NADP-dependent low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.13 Echvi_3950 Glycine/D-amino acid oxidases (deaminating) 0.27 Echvi_3822 NAD-dependent aldehyde dehydrogenases low > 79
Enterobacter sp. TBS_079 0.13 MPMX20_02699 D-amino acid dehydrogenase 0.53 MPMX20_04145 Glutarate-semialdehyde dehydrogenase low > 85
Erwinia tracheiphila SCR3 0.13 LU632_RS13070 D-amino acid dehydrogenase 0.27 LU632_RS10125 NAD-dependent succinate-semialdehyde dehydrogenase low > 74
Marinobacter adhaerens HP15 0.12 HP15_2610 D-amino acid dehydrogenase small subunit 0.58 HP15_2020 succinate-semialdehyde dehydrogenase I low > 73
Serratia liquefaciens MT49 0.12 IAI46_14460 D-amino acid dehydrogenase 0.62 IAI46_22160 NAD-dependent succinate-semialdehyde dehydrogenase low > 86
Sphingomonas koreensis DSMZ 15582 0.11 Ga0059261_3351 Glycine/D-amino acid oxidases (deaminating) 0.28 Ga0059261_1680 NAD-dependent aldehyde dehydrogenases low > 68

Not shown: 41 genomes with orthologs for TX73_019540 only; 9 genomes with orthologs for TX73_012020 only