Conservation of cofitness between TX73_001525 and TX73_002255 in Rhodopseudomonas palustris CGA009

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_001525 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 1.0 TX73_002255 tRNA pseudouridine(55) synthase TruB 0.46 19
Bosea sp. OAE506 0.42 ABIE41_RS04690 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.51 ABIE41_RS04565 tRNA pseudouridine(55) synthase TruB — —
Agrobacterium fabrum C58 0.32 Atu2830 glucose inhibited division protein 0.46 Atu0085 tRNA pseudouridine 55 synthase — —
Sinorhizobium meliloti 1021 0.32 SMc02799 16S rRNA methyltransferase GidB 0.47 SMc00321 tRNA pseudouridine synthase B low > 103
Rhizobium sp. OAE497 0.32 ABIE40_RS19210 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.46 ABIE40_RS00345 tRNA pseudouridine(55) synthase TruB low > 107
Azospirillum sp. SherDot2 0.31 MPMX19_02570 Ribosomal RNA small subunit methyltransferase G 0.41 MPMX19_02524 tRNA pseudouridine synthase B — —
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS13710 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.36 A4249_RS13345 tRNA pseudouridine(55) synthase TruB low > 48
Magnetospirillum magneticum AMB-1 0.30 AMB_RS00015 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.38 AMB_RS20810 tRNA pseudouridine(55) synthase TruB low > 64
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_03870 methyltransferase GidB 0.41 CCNA_00035 tRNA pseudouridine synthase B low > 67
Caulobacter crescentus NA1000 0.29 CCNA_03870 methyltransferase GidB 0.41 CCNA_00035 tRNA pseudouridine synthase B low > 66
Dinoroseobacter shibae DFL-12 0.29 Dshi_3456 methyltransferase GidB (RefSeq) 0.36 Dshi_3042 tRNA pseudouridine synthase B (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.29 PGA1_c35090 ribosomal RNA small subunit methyltransferase G 0.36 PGA1_c32950 tRNA pseudouridine synthase B 0.35 6
Rhodospirillum rubrum S1H 0.27 Rru_A3626 Glucose inhibited division protein (NCBI) 0.38 Rru_A3783 tRNA pseudouridine synthase B (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_2206 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.31 Ga0059261_2142 tRNA pseudouridine(55) synthase low > 68
Ralstonia solanacearum PSI07 0.18 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.24 RPSI07_RS17665 tRNA pseudouridine(55) synthase TruB low > 81
Ralstonia solanacearum GMI1000 0.17 RS_RS16670 ribosomal RNA small subunit methyltransferase G 0.24 RS_RS06470 tRNA pseudouridine(55) synthase TruB — —
Ralstonia solanacearum IBSBF1503 0.16 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.24 RALBFv3_RS15690 tRNA pseudouridine(55) synthase TruB — —
Ralstonia solanacearum UW163 0.16 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.23 UW163_RS13150 tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECOR38 0.15 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 HEPCGN_17000 truB tRNA pseudouridine(55) synthase TruB low > 87
Pseudomonas sp. S08-1 0.15 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.26 OH686_17155 tRNA pseudouridine(55) synthase 0.49 79
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.5135.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.26 Xcc-8004.2004.1 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.49 8
Pseudomonas sp. RS175 0.15 PFR28_04586 Ribosomal RNA small subunit methyltransferase G 0.27 PFR28_00092 tRNA pseudouridine synthase B — —
Escherichia coli BW25113 0.14 b3740 gidB glucose-inhibited division protein B (NCBI) 0.28 b3166 truB tRNA pseudouridine synthase B (NCBI) low > 76
Escherichia coli ECRC62 0.14 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 BNILDI_01610 truB tRNA pseudouridine(55) synthase TruB low > 75
Escherichia coli BL21 0.14 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein 0.28 ECD_03033 tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase low > 61
Escherichia fergusonii Becca 0.14 EFB2_04893 Ribosomal RNA small subunit methyltransferase G 0.28 EFB2_00657 tRNA pseudouridine synthase B low > 86
Escherichia coli Nissle 1917 0.14 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 ECOLIN_RS18185 tRNA pseudouridine(55) synthase TruB low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G 0.28 OHPLBJKB_00534 tRNA pseudouridine synthase B low > 73
Escherichia coli ECRC99 0.14 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 KEDOAH_10025 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECOR27 0.14 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 NOLOHH_09925 truB tRNA pseudouridine(55) synthase TruB low > 75
Escherichia coli ECRC101 0.14 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 MCAODC_08645 truB tRNA pseudouridine(55) synthase TruB 0.57 56
Escherichia coli ECRC98 0.14 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 JDDGAC_21750 truB tRNA pseudouridine(55) synthase TruB 0.94 6
Escherichia coli ECRC100 0.14 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 OKFHMN_18125 truB tRNA pseudouridine(55) synthase TruB low > 80
Escherichia coli ECRC102 0.14 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 NIAGMN_15885 truB tRNA pseudouridine(55) synthase TruB — —
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.27 Psyr_4178 tRNA pseudouridine synthase B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_5131 16S rRNA m(7)G-527 methyltransferase 0.27 Psyr_4178 tRNA pseudouridine synthase B low > 86
Pseudomonas fluorescens GW456-L13 0.13 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB 0.27 PfGW456L13_5086 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 87
Enterobacter asburiae PDN3 0.13 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.28 EX28DRAFT_3217 tRNA pseudouridine(55) synthase low > 76
Pseudomonas stutzeri RCH2 0.13 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB 0.28 Psest_0983 tRNA pseudouridine 55 synthase — —

Not shown: 4 genomes with orthologs for TX73_001525 only; 39 genomes with orthologs for TX73_002255 only