Conservation of cofitness between SMc02553 and SMc00647 in Sinorhizobium meliloti 1021

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc02553 hypothetical protein 1.0 SMc00647 ribosomal large subunit pseudouridine synthase 0.35 14
Rhizobium sp. OAE497 0.67 ABIE40_RS06175 SOS response-associated peptidase 0.73 ABIE40_RS14790 RluA family pseudouridine synthase low > 107
Agrobacterium fabrum C58 0.64 Atu1059 hypothetical protein 0.79 Atu2443 ribosomal large subunit pseudouridine synthase, RluD subfamily — —
Bosea sp. OAE506 0.39 ABIE41_RS22245 SOS response-associated peptidase 0.49 ABIE41_RS05635 RluA family pseudouridine synthase low > 77
Rhodopseudomonas palustris CGA009 0.33 TX73_005525 SOS response-associated peptidase 0.49 TX73_001905 RluA family pseudouridine synthase low > 86
Rhodospirillum rubrum S1H 0.26 Rru_A3713 Protein of unknown function DUF159 (NCBI) 0.41 Rru_A1111 Pseudouridine synthase, RluD (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.24 Dshi_0851 protein of unknown function DUF159 (RefSeq) 0.36 Dshi_2610 pseudouridine synthase, RluA family (RefSeq) low > 64
Azospirillum sp. SherDot2 0.23 MPMX19_01088 hypothetical protein 0.46 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D low > 112
Mycobacterium tuberculosis H37Rv 0.23 Rv3226c Conserved hypothetical protein 0.21 Rv1540 Conserved hypothetical protein member of yabO/yceC/yfiI family — —
Marinobacter adhaerens HP15 0.20 HP15_875 protein containing DUF159 0.33 HP15_527 pseudouridine synthase, RluA family low > 73
Rhodanobacter denitrificans MT42 0.19 LRK55_RS18630 SOS response-associated peptidase 0.34 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 63
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_3888 Uncharacterized conserved protein 0.35 Echvi_0642 pseudouridine synthase, RluA family low > 79
Escherichia coli Nissle 1917 0.17 ECOLIN_RS11020 SOS response-associated peptidase 0.30 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_0983 Protein of unknown function DUF159 0.32 Psyr_0726 ribosomal large subunit pseudouridine synthase D low > 86
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_0983 Protein of unknown function DUF159 0.32 Psyr_0726 ribosomal large subunit pseudouridine synthase D low > 86
Escherichia coli ECRC62 0.17 BNILDI_15145 yedK Abasic site processing protein YedK 0.30 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Escherichia coli BW25113 0.17 b1931 yedK hypothetical protein (NCBI) 0.30 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) — —
Escherichia coli ECRC100 0.17 OKFHMN_25735 yedK Abasic site processing protein YedK 0.30 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECRC99 0.17 KEDOAH_02355 yedK Abasic site processing protein YedK 0.30 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECRC98 0.17 JDDGAC_00325 yedK Abasic site processing protein YedK 0.30 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 86
Escherichia coli ECRC101 0.17 MCAODC_19655 yedK Abasic site processing protein YedK 0.30 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Escherichia coli ECRC102 0.17 NIAGMN_02315 yedK Abasic site processing protein YedK 0.30 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia fergusonii Becca 0.17 EFB2_02014 SOS response-associated protein YedK 0.30 EFB2_01296 Ribosomal large subunit pseudouridine synthase D low > 86
Escherichia coli ECOR27 0.17 NOLOHH_16355 yedK Abasic site processing protein YedK 0.30 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75
Enterobacter asburiae PDN3 0.16 EX28DRAFT_1552 Uncharacterized conserved protein 0.29 EX28DRAFT_2695 pseudouridine synthase, RluA family low > 76
Escherichia coli ECOR38 0.16 HEPCGN_04090 yedK Abasic site processing protein YedK 0.30 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 87
Enterobacter sp. TBS_079 0.16 MPMX20_04740 SOS response-associated protein YedK 0.29 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D low > 85
Pseudomonas sp. RS175 0.16 PFR28_03627 SOS response-associated protein YedK 0.32 PFR28_03748 Ribosomal large subunit pseudouridine synthase D low > 88
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1612 FIG00956396: hypothetical protein 0.33 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) — —
Pseudomonas fluorescens SBW25 0.16 PFLU_RS04550 SOS response-associated peptidase 0.32 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS04550 SOS response-associated peptidase 0.32 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_16640 hypothetical protein 0.32 AO356_15925 ribosomal large subunit pseudouridine synthase D — —
Pseudomonas simiae WCS417 0.15 PS417_04505 hypothetical protein 0.32 PS417_03820 ribosomal large subunit pseudouridine synthase D — —
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_2949 FIG00956396: hypothetical protein 0.32 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) — —

Not shown: 2 genomes with orthologs for SMc02553 only; 59 genomes with orthologs for SMc00647 only