Conservation of cofitness between SMc02553 and SMc00321 in Sinorhizobium meliloti 1021

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc02553 hypothetical protein 1.0 SMc00321 tRNA pseudouridine synthase B 0.37 9
Rhizobium sp. OAE497 0.67 ABIE40_RS06175 SOS response-associated peptidase 0.83 ABIE40_RS00345 tRNA pseudouridine(55) synthase TruB low > 107
Agrobacterium fabrum C58 0.64 Atu1059 hypothetical protein 0.83 Atu0085 tRNA pseudouridine 55 synthase low > 89
Bosea sp. OAE506 0.39 ABIE41_RS22245 SOS response-associated peptidase 0.54 ABIE41_RS04565 tRNA pseudouridine(55) synthase TruB low > 77
Rhodopseudomonas palustris CGA009 0.33 TX73_005525 SOS response-associated peptidase 0.55 TX73_002255 tRNA pseudouridine(55) synthase TruB low > 86
Rhodospirillum rubrum S1H 0.26 Rru_A3713 Protein of unknown function DUF159 (NCBI) 0.41 Rru_A3783 tRNA pseudouridine synthase B (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.24 Dshi_0851 protein of unknown function DUF159 (RefSeq) 0.46 Dshi_3042 tRNA pseudouridine synthase B (RefSeq) low > 64
Azospirillum sp. SherDot2 0.23 MPMX19_01088 hypothetical protein 0.43 MPMX19_02524 tRNA pseudouridine synthase B low > 112
Marinobacter adhaerens HP15 0.20 HP15_875 protein containing DUF159 0.27 HP15_3065 tRNA pseudouridine synthase B low > 73
Rhodanobacter denitrificans MT42 0.19 LRK55_RS18630 SOS response-associated peptidase 0.34 LRK55_RS00810 tRNA pseudouridine(55) synthase TruB low > 63
Escherichia coli Nissle 1917 0.17 ECOLIN_RS11020 SOS response-associated peptidase 0.30 ECOLIN_RS18185 tRNA pseudouridine(55) synthase TruB — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_0983 Protein of unknown function DUF159 0.33 Psyr_4178 tRNA pseudouridine synthase B low > 86
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_0983 Protein of unknown function DUF159 0.33 Psyr_4178 tRNA pseudouridine synthase B low > 86
Escherichia coli ECRC62 0.17 BNILDI_15145 yedK Abasic site processing protein YedK 0.30 BNILDI_01610 truB tRNA pseudouridine(55) synthase TruB low > 75
Escherichia coli BW25113 0.17 b1931 yedK hypothetical protein (NCBI) 0.30 b3166 truB tRNA pseudouridine synthase B (NCBI) low > 76
Escherichia coli ECRC98 0.17 JDDGAC_00325 yedK Abasic site processing protein YedK 0.30 JDDGAC_21750 truB tRNA pseudouridine(55) synthase TruB low > 86
Escherichia coli ECRC99 0.17 KEDOAH_02355 yedK Abasic site processing protein YedK 0.30 KEDOAH_10025 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC100 0.17 OKFHMN_25735 yedK Abasic site processing protein YedK 0.30 OKFHMN_18125 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC102 0.17 NIAGMN_02315 yedK Abasic site processing protein YedK 0.30 NIAGMN_15885 truB tRNA pseudouridine(55) synthase TruB — —
Escherichia coli ECRC101 0.17 MCAODC_19655 yedK Abasic site processing protein YedK 0.31 MCAODC_08645 truB tRNA pseudouridine(55) synthase TruB low > 87
Escherichia coli ECOR27 0.17 NOLOHH_16355 yedK Abasic site processing protein YedK 0.30 NOLOHH_09925 truB tRNA pseudouridine(55) synthase TruB low > 75
Escherichia fergusonii Becca 0.17 EFB2_02014 SOS response-associated protein YedK 0.30 EFB2_00657 tRNA pseudouridine synthase B low > 86
Enterobacter asburiae PDN3 0.16 EX28DRAFT_1552 Uncharacterized conserved protein 0.28 EX28DRAFT_3217 tRNA pseudouridine(55) synthase low > 76
Escherichia coli ECOR38 0.16 HEPCGN_04090 yedK Abasic site processing protein YedK 0.30 HEPCGN_17000 truB tRNA pseudouridine(55) synthase TruB low > 87
Enterobacter sp. TBS_079 0.16 MPMX20_04740 SOS response-associated protein YedK 0.28 MPMX20_04071 tRNA pseudouridine synthase B low > 85
Pseudomonas sp. RS175 0.16 PFR28_03627 SOS response-associated protein YedK 0.34 PFR28_00092 tRNA pseudouridine synthase B — —
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1612 FIG00956396: hypothetical protein 0.33 PfGW456L13_5086 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 87
Pseudomonas fluorescens SBW25 0.16 PFLU_RS04550 SOS response-associated peptidase 0.32 PFLU_RS25800 tRNA pseudouridine(55) synthase TruB — —
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS04550 SOS response-associated peptidase 0.32 PFLU_RS25800 tRNA pseudouridine(55) synthase TruB — —
Pseudomonas fluorescens FW300-N2C3 0.16 AO356_16640 hypothetical protein 0.33 AO356_07400 pseudouridine synthase — —
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_2949 FIG00956396: hypothetical protein 0.33 Pf1N1B4_1159 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 87
Pseudomonas simiae WCS417 0.15 PS417_04505 hypothetical protein 0.33 PS417_23960 pseudouridine synthase — —
Pseudomonas stutzeri RCH2 0.14 Psest_3230 Uncharacterized conserved protein 0.33 Psest_0983 tRNA pseudouridine 55 synthase — —

Not shown: 3 genomes with orthologs for SMc02553 only; 49 genomes with orthologs for SMc00321 only