Conservation of cofitness between SMc00923 and SMa0307 in Sinorhizobium meliloti 1021

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00923 DNA-3-methyladenine DNA glycosylase 1.0 SMa0307 LysR family transcriptional regulator 0.20 14
Agrobacterium fabrum C58 0.76 Atu0670 3-methyladenine-DNA glycosylase 0.88 Atu5084 LysR family transcriptional regulator low > 89
Pseudomonas simiae WCS417 0.65 PS417_15050 3-methyladenine DNA glycosylase 0.25 PS417_13375 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.65 PFLU_RS17070 DNA-3-methyladenine glycosylase I 0.25 PFLU_RS15415 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS17070 DNA-3-methyladenine glycosylase I 0.25 PFLU_RS15415 LysR family transcriptional regulator low > 109
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS19630 3-methyladenine DNA glycosylase 0.23 RR42_RS30005 LysR family transcriptional regulator low > 128
Escherichia coli Nissle 1917 0.43 ECOLIN_RS20310 DNA-3-methyladenine glycosylase I 0.20 ECOLIN_RS00410 transcriptional regulator LeuO low > 52
Escherichia coli ECOR38 0.43 HEPCGN_14930 tag DNA-3-methyladenine glycosylase I 0.19 HEPCGN_08685 leuO transcriptional regulator LeuO low > 85
Escherichia fergusonii Becca 0.43 EFB2_00258 DNA-3-methyladenine glycosylase 1 0.20 EFB2_03970 HTH-type transcriptional regulator LeuO low > 86
Escherichia coli BL21 0.43 ECD_03399 3-methyl-adenine DNA glycosylase I, constitutive 0.19 ECD_00078 global transcription factor low > 60
Escherichia coli ECRC101 0.43 MCAODC_06555 tag DNA-3-methyladenine glycosylase I 0.20 MCAODC_01220 leuO transcriptional regulator LeuO — —
Escherichia coli ECRC101 0.43 OKFHMN_16040 tag DNA-3-methyladenine glycosylase I 0.20 OKFHMN_10705 leuO transcriptional regulator LeuO — —
Escherichia coli ECRC98 0.43 JDDGAC_19670 tag DNA-3-methyladenine glycosylase I 0.20 JDDGAC_14300 leuO transcriptional regulator LeuO — —
Escherichia coli ECRC99 0.43 KEDOAH_12110 tag DNA-3-methyladenine glycosylase I 0.20 KEDOAH_17450 leuO transcriptional regulator LeuO — —
Escherichia coli ECRC102 0.43 NIAGMN_13800 tag DNA-3-methyladenine glycosylase I 0.20 NIAGMN_08555 leuO transcriptional regulator LeuO — —
Escherichia coli ECOR27 0.42 NOLOHH_07985 tag DNA-3-methyladenine glycosylase I 0.19 NOLOHH_03050 leuO transcriptional regulator LeuO low > 57
Escherichia coli ECRC62 0.42 BNILDI_03560 tag DNA-3-methyladenine glycosylase I 0.19 BNILDI_08560 leuO transcriptional regulator LeuO — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_3809 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) 0.20 EX28DRAFT_3672 Transcriptional regulator low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00157 DNA-3-methyladenine glycosylase 1 0.19 OHPLBJKB_03582 HTH-type transcriptional regulator LeuO low > 73
Escherichia coli BW25113 0.42 b3549 tag 3-methyl-adenine DNA glycosylase I, constitutive (NCBI) 0.19 b0076 leuO probable transcriptional activator for leuABCD operon (VIMSS) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF463 DNA-3-methyladenine glycosylase (EC 3.2.2.20) 0.19 GFF162 Probable transcriptional activator for leuABCD operon low > 78
Klebsiella michiganensis M5al 0.42 BWI76_RS26920 DNA-3-methyladenine glycosylase I 0.20 BWI76_RS04690 transcriptional regulator LeuO low > 92
Paraburkholderia graminis OAS925 0.41 ABIE53_000137 DNA-3-methyladenine glycosylase I 0.49 ABIE53_002632 LysR family transcriptional activator of mexEF-oprN operon low > 113
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_05730 DNA-3-methyladenine glycosylase I 0.25 H281DRAFT_01652 DNA-binding transcriptional regulator, LysR family low > 103
Pectobacterium carotovorum WPP14 0.40 HER17_RS21160 DNA-3-methyladenine glycosylase I 0.25 HER17_RS04190 LysR family transcriptional regulator low > 75
Serratia liquefaciens MT49 0.39 IAI46_00120 DNA-3-methyladenine glycosylase I 0.20 IAI46_03365 transcriptional regulator LeuO low > 86
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS19065 DNA-3-methyladenine glycosidase 0.24 BPHYT_RS10685 LysR family transcriptional regulator low > 109
Rahnella sp. WP5 0.37 EX31_RS05880 DNA-3-methyladenine glycosylase I 0.21 EX31_RS00910 LysR family transcriptional regulator low > 89
Alteromonas macleodii MIT1002 0.35 MIT1002_00008 DNA-3-methyladenine glycosylase 1 0.20 MIT1002_01758 HTH-type transcriptional regulator LeuO low > 70
Pseudomonas putida KT2440 0.32 PP_0062 3-methyl-adenine DNA glycosylase I 0.24 PP_2826 Transcriptional regulator MexT low > 96
Pseudomonas sp. S08-1 0.31 OH686_12550 DNA-3-methyladenine glycosylase 0.23 OH686_01015 Transcriptional regulator MexT low > 80
Pseudomonas sp. RS175 0.29 PFR28_04602 DNA-3-methyladenine glycosylase 1 0.25 PFR28_01737 Nodulation protein D 2 low > 88
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_10605 3-methyladenine DNA glycosylase 0.25 AO353_24105 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_1918 DNA-3-methyladenine glycosylase (EC 3.2.2.20) 0.26 Pf1N1B4_4882 Transcriptional regulator MexT — —
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_657 DNA-3-methyladenine glycosylase (EC 3.2.2.20) 0.26 PfGW456L13_3062 Transcriptional regulator MexT — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_11590 3-methyladenine DNA glycosylase 0.23 AO356_27085 LysR family transcriptional regulator low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_0013 DNA-3-methyladenine glycosylase I 0.26 Psyr_2913 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_0013 DNA-3-methyladenine glycosylase I 0.26 Psyr_2913 transcriptional regulator, LysR family low > 86

Not shown: 52 genomes with orthologs for SMc00923 only; 2 genomes with orthologs for SMa0307 only