Conservation of cofitness between SMc00427 and SM_b20146 in Sinorhizobium meliloti 1021

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00427 peptide chain release factor RF-3 protein 1.0 SM_b20146 pyridoxal phosphate biosynthetic protein 0.63 2
Rhizobium sp. OAE497 0.89 ABIE40_RS01450 peptide chain release factor 3 0.59 ABIE40_RS25790 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 107
Agrobacterium fabrum C58 0.88 Atu0315 peptide chain release factor 3 0.84 Atu5073 pyridoxal phosphate biosynthesis protein — —
Bosea sp. OAE506 0.68 ABIE41_RS06180 peptide chain release factor 3 0.34 ABIE41_RS20430 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 77
Azospirillum brasilense Sp245 0.55 AZOBR_RS14730 peptide chain release factor 3 0.41 AZOBR_RS27610 4-hydroxythreonine-4-phosphate dehydrogenase — —
Azospirillum sp. SherDot2 0.52 MPMX19_01192 Peptide chain release factor 3 0.40 MPMX19_02810 D-threonate 4-phosphate dehydrogenase — —
Escherichia coli Nissle 1917 0.50 ECOLIN_RS25110 peptide chain release factor 3 0.42 ECOLIN_RS03665 D-threonate 4-phosphate dehydrogenase — —
Escherichia fergusonii Becca 0.50 EFB2_04072 Peptide chain release factor RF3 0.42 EFB2_03416 D-threonate 4-phosphate dehydrogenase low > 86
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS23485 peptide chain release factor 3 0.37 ABZR87_RS05840 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 80
Klebsiella michiganensis M5al 0.49 BWI76_RS04100 peptide chain release factor 3 0.40 BWI76_RS15230 4-hydroxythreonine-4-phosphate dehydrogenase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1035 Peptide chain release factor 3 0.42 GFF110 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) low > 78
Pantoea sp. MT58 0.49 IAI47_03375 peptide chain release factor 3 0.39 IAI47_15730 D-threonate 4-phosphate dehydrogenase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03538 bacterial peptide chain release factor 3 (bRF-3) 0.43 H281DRAFT_00649 4-hydroxythreonine-4-phosphate dehydrogenase — —
Erwinia tracheiphila SCR3 0.49 LU632_RS02475 prfC peptide chain release factor 3 0.42 LU632_RS04955 D-threonate 4-phosphate dehydrogenase — —
Paraburkholderia graminis OAS925 0.48 ABIE53_004717 peptide chain release factor 3 0.43 ABIE53_003878 4-hydroxythreonine-4-phosphate dehydrogenase low > 113
Dickeya dianthicola 67-19 0.48 HGI48_RS02400 peptide chain release factor 3 0.42 HGI48_RS17775 D-threonate 4-phosphate dehydrogenase — —
Dickeya dianthicola ME23 0.48 DZA65_RS02505 peptide chain release factor 3 0.42 DZA65_RS18920 D-threonate 4-phosphate dehydrogenase low > 75
Dickeya dadantii 3937 0.48 DDA3937_RS02445 peptide chain release factor 3 0.42 DDA3937_RS17835 D-threonate 4-phosphate dehydrogenase low > 74
Pectobacterium carotovorum WPP14 0.48 HER17_RS19065 peptide chain release factor 3 0.42 HER17_RS03455 D-threonate 4-phosphate dehydrogenase low > 75
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS17200 peptide chain release factor 3 0.44 QEN71_RS36665 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS12505 peptide chain release factor 3 0.36 ABCV34_RS02270 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF768 Peptide chain release factor 3 0.36 GFF1297 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Variovorax sp. SCN45 0.47 GFF2045 Peptide chain release factor 3 0.35 GFF5368 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Acidovorax sp. GW101-3H11 0.47 Ac3H11_3041 Peptide chain release factor 3 0.33 Ac3H11_4747 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.46 Echvi_0584 peptide chain release factor 3 0.42 Echvi_0923 4-hydroxythreonine-4-phosphate dehydrogenase low > 79
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS04145 peptide chain release factor 3 0.24 HMPREF1078_RS14540 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS18435 peptide chain release factor 3 0.29 CA265_RS18320 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Phocaeicola vulgatus CL09T03C04 0.42 HMPREF1058_RS07935 peptide chain release factor 3 0.26 HMPREF1058_RS17035 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Phocaeicola dorei CL03T12C01 0.42 ABI39_RS00385 peptide chain release factor 3 0.26 ABI39_RS12955 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —

Not shown: 65 genomes with orthologs for SMc00427 only; 3 genomes with orthologs for SM_b20146 only