Conservation of cofitness between RR42_RS07425 and RR42_RS12175 in Cupriavidus basilensis FW507-4G11

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS07425 IclR family transcriptional regulator 1.0 RR42_RS12175 malate synthase 0.95 1
Ralstonia sp. UNC404CL21Col 0.92 ABZR87_RS13415 IclR family transcriptional regulator 0.91 ABZR87_RS11625 malate synthase A 0.87 1
Ralstonia solanacearum PSI07 0.91 RPSI07_RS15870 IclR family transcriptional regulator 0.87 RPSI07_RS17310 malate synthase A low > 81
Ralstonia solanacearum UW163 0.91 UW163_RS14925 IclR family transcriptional regulator 0.87 UW163_RS13500 malate synthase A — —
Ralstonia solanacearum IBSBF1503 0.91 RALBFv3_RS01615 IclR family transcriptional regulator 0.87 RALBFv3_RS00170 malate synthase A low > 76
Ralstonia solanacearum GMI1000 0.91 RS_RS08105 IclR family transcriptional regulator 0.87 RS_RS06835 malate synthase A — —
Paraburkholderia graminis OAS925 0.80 ABIE53_002788 IclR family KDG regulon transcriptional repressor 0.79 ABIE53_002540 malate synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.80 H281DRAFT_00471 transcriptional regulator, IclR family 0.79 H281DRAFT_00576 malate synthase 0.78 2
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS12815 IclR family transcriptional regulator 0.79 BPHYT_RS12305 Malate synthase (EC 2.3.3.9) (from data) low > 109
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS05750 IclR family transcriptional regulator 0.80 QEN71_RS06250 malate synthase A low > 153
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS08180 IclR family transcriptional regulator 0.86 HSERO_RS15200 malate synthase — —
Dechlorosoma suillum PS 0.54 Dsui_0127 transcriptional regulator 0.77 Dsui_0019 malate synthase A 0.56 1
Escherichia coli BW25113 0.25 b0272 yagI CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) 0.44 b4014 aceB malate synthase (NCBI) low > 76
Enterobacter sp. TBS_079 0.25 MPMX20_00555 HTH-type transcriptional regulator XynR 0.44 MPMX20_00231 Malate synthase A low > 85
Enterobacter asburiae PDN3 0.24 EX28DRAFT_3458 transcriptional regulator, IclR family 0.44 EX28DRAFT_4330 malate synthase A low > 76
Dickeya dadantii 3937 0.24 DDA3937_RS18500 IclR family transcriptional regulator 0.45 DDA3937_RS19060 malate synthase A low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF436 Transcriptional regulator, IclR family 0.44 GFF1351 Malate synthase (EC 2.3.3.9) low > 78
Dickeya dianthicola 67-19 0.23 HGI48_RS18425 IclR family transcriptional regulator 0.45 HGI48_RS19150 malate synthase A low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS19560 helix-turn-helix domain-containing protein 0.45 DZA65_RS20270 malate synthase A low > 75
Serratia liquefaciens MT49 0.23 IAI46_20925 IclR family transcriptional regulator 0.45 IAI46_23195 malate synthase A low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00130 DNA-binding transcriptional repressor YiaJ 0.44 OHPLBJKB_04036 Malate synthase A low > 73
Escherichia coli BL21 0.23 ECD_03426 transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon 0.44 ECD_03886 malate synthase A low > 61
Escherichia coli ECOR38 0.23 HEPCGN_14790 yiaJ IclR family transcriptional regulator YiaJ 0.44 HEPCGN_11910 aceB malate synthase A low > 87
Escherichia coli Nissle 1917 0.23 ECOLIN_RS20440 IclR family transcriptional regulator YiaJ 0.44 ECOLIN_RS25510 malate synthase A — —
Escherichia fergusonii Becca 0.23 EFB2_00233 DNA-binding transcriptional repressor YiaJ 0.44 EFB2_04596 Malate synthase A low > 86
Escherichia coli ECRC62 0.23 BNILDI_03700 yiaJ IclR family transcriptional regulator YiaJ 0.44 BNILDI_06105 aceB malate synthase A low > 75
Escherichia coli ECOR27 0.23 NOLOHH_07845 yiaJ IclR family transcriptional regulator YiaJ 0.44 NOLOHH_05415 aceB malate synthase A low > 75
Klebsiella michiganensis M5al 0.22 BWI76_RS27075 IclR family transcriptional regulator 0.44 BWI76_RS01660 malate synthase A low > 92
Shewanella sp. ANA-3 0.14 Shewana3_1275 IclR family transcriptional regulator (RefSeq) 0.46 Shewana3_2943 malate synthase (RefSeq) low > 73

Not shown: 14 genomes with orthologs for RR42_RS07425 only; 24 genomes with orthologs for RR42_RS12175 only