Conservation of cofitness between RR42_RS07655 and RR42_RS09010 in Cupriavidus basilensis FW507-4G11

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS07655 cystathionine beta-lyase 1.0 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.37 15
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS13260 cystathionine beta-lyase 0.52 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Ralstonia solanacearum GMI1000 0.74 RS_RS08260 cystathionine beta-lyase 0.51 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS01465 cystathionine beta-lyase 0.51 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Ralstonia solanacearum PSI07 0.73 RPSI07_RS16025 cystathionine beta-lyase 0.52 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 81
Ralstonia solanacearum UW163 0.73 UW163_RS14775 cystathionine beta-lyase 0.51 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_00859 cystathionine beta-lyase 0.42 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 103
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS09190 cystathionine beta-lyase 0.42 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 109
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS22165 cystathionine beta-lyase 0.42 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 153
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS14995 cystathionine beta-lyase 0.22 HSERO_RS23825 hypothetical protein low > 78
Variovorax sp. OAS795 0.45 ABID97_RS14295 cystathionine beta-lyase 0.20 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 91
Variovorax sp. SCN45 0.43 GFF1012 Cystathionine beta-lyase (EC 4.4.1.8) 0.22 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 127
Acidovorax sp. GW101-3H11 0.42 Ac3H11_4146 Cystathionine beta-lyase (EC 4.4.1.8) 0.22 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 79
Serratia liquefaciens MT49 0.36 IAI46_21725 cystathionine beta-lyase 0.23 IAI46_18000 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 86
Rahnella sp. WP5 0.35 EX31_RS08025 cystathionine beta-lyase 0.21 EX31_RS19660 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 89
Escherichia coli ECOR38 0.35 HEPCGN_17825 metC cystathionine beta-lyase 0.24 HEPCGN_21845 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Escherichia coli BL21 0.35 ECD_02881 cystathionine beta-lyase, PLP-dependent 0.23 ECD_02249 fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme low > 61
Escherichia coli ECRC98 0.35 JDDGAC_22595 metC cystathionine beta-lyase 0.24 JDDGAC_26600 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 86
Escherichia coli ECRC102 0.35 NIAGMN_16725 metC cystathionine beta-lyase 0.24 NIAGMN_20415 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Escherichia coli ECOR27 0.35 NOLOHH_10735 metC cystathionine beta-lyase 0.24 NOLOHH_14275 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Escherichia coli ECRC99 0.35 KEDOAH_09185 metC cystathionine beta-lyase 0.24 KEDOAH_05555 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Escherichia coli ECRC62 0.35 BNILDI_00780 metC cystathionine beta-lyase 0.24 BNILDI_13195 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Escherichia coli ECRC100 0.35 OKFHMN_18960 metC cystathionine beta-lyase 0.24 OKFHMN_22640 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00693 Cystathionine beta-lyase MetC 0.24 OHPLBJKB_01381 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 73
Escherichia coli ECRC101 0.35 MCAODC_09475 metC cystathionine beta-lyase 0.24 MCAODC_13680 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Escherichia coli BW25113 0.34 b3008 metC cystathionine beta-lyase (NCBI) 0.24 b2324 b2324 putative peptidase (VIMSS) low > 76
Klebsiella michiganensis M5al 0.34 BWI76_RS24285 cystathionine beta-lyase 0.22 BWI76_RS20410 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 92
Escherichia coli Nissle 1917 0.34 ECOLIN_RS17315 cystathionine beta-lyase 0.24 ECOLIN_RS13465 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 55
Enterobacter asburiae PDN3 0.34 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.23 EX28DRAFT_0280 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain low > 76
Escherichia fergusonii Becca 0.34 EFB2_00802 Cystathionine beta-lyase MetC 0.24 EFB2_01534 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 86
Enterobacter sp. TBS_079 0.34 MPMX20_03852 Cystathionine beta-lyase MetC 0.22 MPMX20_03259 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 85
Dickeya dadantii 3937 0.34 DDA3937_RS01815 cystathionine beta-lyase 0.23 DDA3937_RS14515 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 74
Dickeya dianthicola ME23 0.34 DZA65_RS01785 cystathionine beta-lyase 0.23 DZA65_RS15420 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Dickeya dianthicola 67-19 0.34 HGI48_RS01710 cystathionine beta-lyase 0.23 HGI48_RS14485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 71
Pectobacterium carotovorum WPP14 0.34 HER17_RS19690 cystathionine beta-lyase 0.22 HER17_RS06960 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Pantoea sp. MT58 0.32 IAI47_03215 cystathionine beta-lyase 0.23 IAI47_06175 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76

Not shown: 6 genomes with orthologs for RR42_RS07655 only; 29 genomes with orthologs for RR42_RS09010 only