Conservation of cofitness between QEN71_RS14195 and QEN71_RS24955 in Paraburkholderia sabiae LMG 24235

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS14195 phosphonate metabolism transcriptional regulator PhnF 1.0 QEN71_RS24955 phosphoenolpyruvate carboxylase 0.64 16
Burkholderia phytofirmans PsJN 0.90 BPHYT_RS29455 GntR family transcriptional regulator 0.81 BPHYT_RS05225 phosphoenolpyruvate carboxylase — —
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS28080 GntR family transcriptional regulator 0.59 RR42_RS15905 phosphoenolpyruvate carboxylase low > 128
Rhodopseudomonas palustris CGA009 0.32 TX73_003600 phosphonate metabolism transcriptional regulator PhnF 0.41 TX73_009115 phosphoenolpyruvate carboxylase low > 86
Acidovorax sp. GW101-3H11 0.32 Ac3H11_4540 Transcriptional regulator PhnF 0.51 Ac3H11_3553 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 79
Variovorax sp. SCN45 0.29 GFF6262 Transcriptional regulator PhnF 0.48 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 127
Pantoea sp. MT58 0.19 IAI47_07750 phosphonate metabolism transcriptional regulator PhnF 0.20 IAI47_00895 phosphoenolpyruvate carboxylase 0.15 42
Dickeya dadantii 3937 0.18 DDA3937_RS07595 phosphonate metabolism transcriptional regulator PhnF 0.19 DDA3937_RS20360 phosphoenolpyruvate carboxylase low > 74
Dickeya dianthicola ME23 0.18 DZA65_RS07950 phosphonate metabolism transcriptional regulator PhnF 0.19 DZA65_RS00895 phosphoenolpyruvate carboxylase low > 75
Dickeya dianthicola 67-19 0.18 HGI48_RS07445 phosphonate metabolism transcriptional regulator PhnF 0.19 HGI48_RS00850 phosphoenolpyruvate carboxylase low > 71
Escherichia coli BW25113 0.18 b4102 phnF predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation (NCBI) 0.19 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) low > 76
Escherichia coli ECOR38 0.18 HEPCGN_11275 phnF phosphonate metabolism transcriptional regulator PhnF 0.19 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase low > 87
Escherichia coli ECRC62 0.18 BNILDI_06590 phnF phosphonate metabolism transcriptional regulator PhnF 0.19 BNILDI_05785 ppc phosphoenolpyruvate carboxylase low > 75
Escherichia coli BL21 0.18 ECD_03974 putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation 0.19 ECD_03841 phosphoenolpyruvate carboxylase low > 61
Escherichia coli ECOR27 0.18 NOLOHH_04905 phnF phosphonate metabolism transcriptional regulator PhnF 0.19 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase 0.75 6
Escherichia coli ECRC102 0.17 NIAGMN_10490 phnF phosphonate metabolism transcriptional regulator PhnF 0.19 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC98 0.17 JDDGAC_16280 phnF phosphonate metabolism transcriptional regulator PhnF 0.19 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase low > 86
Escherichia coli ECRC101 0.17 MCAODC_03155 phnF phosphonate metabolism transcriptional regulator PhnF 0.19 MCAODC_04095 ppc phosphoenolpyruvate carboxylase low > 87
Escherichia coli Nissle 1917 0.17 ECOLIN_RS23750 phosphonate metabolism transcriptional regulator PhnF 0.19 ECOLIN_RS22835 phosphoenolpyruvate carboxylase low > 55
Escherichia coli ECRC99 0.17 KEDOAH_15520 phnF phosphonate metabolism transcriptional regulator PhnF 0.19 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC100 0.17 OKFHMN_12645 phnF phosphonate metabolism transcriptional regulator PhnF 0.19 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase low > 80
Escherichia fergusonii Becca 0.17 EFB2_04480 putative transcriptional regulator PhnF 0.19 EFB2_04658 Phosphoenolpyruvate carboxylase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_03942 putative transcriptional regulator PhnF 0.19 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase low > 73
Serratia liquefaciens MT49 0.17 IAI46_02110 phosphonate metabolism transcriptional regulator PhnF 0.20 IAI46_24525 phosphoenolpyruvate carboxylase low > 86
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS08755 phosphonate metabolism transcriptional regulator PhnF 0.19 PFLU_RS06130 phosphoenolpyruvate carboxylase low > 109
Pseudomonas fluorescens SBW25 0.17 PFLU_RS08755 phosphonate metabolism transcriptional regulator PhnF 0.19 PFLU_RS06130 phosphoenolpyruvate carboxylase 0.49 75
Rahnella sp. WP5 0.16 EX31_RS08405 phosphonate metabolism transcriptional regulator PhnF 0.20 EX31_RS14200 phosphoenolpyruvate carboxylase low > 89
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_17220 phosphonate utilization transcriptional regulator PhnR 0.19 CSW01_13390 phosphoenolpyruvate carboxylase low > 62
Klebsiella michiganensis M5al 0.16 BWI76_RS02230 phosphonate metabolism transcriptional regulator PhnF 0.20 BWI76_RS00835 phosphoenolpyruvate carboxylase low > 92
Enterobacter sp. TBS_079 0.15 MPMX20_00322 putative transcriptional regulator PhnF 0.20 MPMX20_04524 Phosphoenolpyruvate carboxylase low > 85
Enterobacter asburiae PDN3 0.15 EX28DRAFT_4203 phosphonates metabolism transcriptional regulator PhnF 0.20 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) low > 76
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_2250 transcriptional regulator, GntR family 0.19 Psyr_1318 Phosphoenolpyruvate carboxylase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_2250 transcriptional regulator, GntR family 0.19 Psyr_1318 Phosphoenolpyruvate carboxylase low > 86
Pseudomonas putida KT2440 0.15 PP_1727 Transcriptional regulator, GntR family 0.19 PP_1505 Phosphoenolpyruvate carboxylase low > 96
Pseudomonas stutzeri RCH2 0.14 Psest_0097 phosphonates metabolism transcriptional regulator PhnF 0.19 Psest_1557 Phosphoenolpyruvate carboxylase low > 67

Not shown: 5 genomes with orthologs for QEN71_RS14195 only; 44 genomes with orthologs for QEN71_RS24955 only