Conservation of cofitness between QEN71_RS03230 and QEN71_RS20525 in Paraburkholderia sabiae LMG 24235

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS03230 YggT family protein 1.0 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase 0.63 17
Paraburkholderia bryophila 376MFSha3.1 0.86 H281DRAFT_04033 YggT family protein 0.93 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) low > 103
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS15440 membrane protein 0.91 BPHYT_RS29625 6-phosphogluconate dehydrogenase
Paraburkholderia graminis OAS925 0.81 ABIE53_003258 YggT family protein 0.93 ABIE53_005122 6-phosphogluconate dehydrogenase low > 113
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_02445 hypothetical protein 0.54 CSW01_18635 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) low > 62
Klebsiella michiganensis M5al 0.31 BWI76_RS24105 resistance protein 0.75 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) low > 92
Alteromonas macleodii MIT1002 0.31 MIT1002_03063 YGGT family protein 0.47 MIT1002_02397 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating low > 70
Enterobacter sp. TBS_079 0.30 MPMX20_03810 hypothetical protein 0.76 MPMX20_03014 6-phosphogluconate dehydrogenase, decarboxylating low > 85
Enterobacter asburiae PDN3 0.30 EX28DRAFT_2990 Predicted integral membrane protein 0.75 EX28DRAFT_0529 6-phosphogluconate dehydrogenase (decarboxylating) low > 76
Pectobacterium carotovorum WPP14 0.29 HER17_RS03800 YggT family protein 0.76 HER17_RS14505 NADP-dependent phosphogluconate dehydrogenase low > 75
Pantoea sp. MT58 0.29 IAI47_03590 YggT family protein 0.76 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC101 0.29 MCAODC_09770 yggT osmotic shock tolerance protein YggT 0.76 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase low > 87
Escherichia coli Nissle 1917 0.29 ECOLIN_RS16420 osmotic shock tolerance protein YggT 0.75 ECOLIN_RS11990 NADP-dependent phosphogluconate dehydrogenase
Escherichia coli BL21 0.29 ECD_02782 putative inner membrane protein; compensates for loss in K+ uptake 0.76 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating
Escherichia coli ECOR27 0.29 NOLOHH_11120 yggT osmotic shock tolerance protein YggT 0.75 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase low > 75
Escherichia coli ECRC62 0.29 BNILDI_09700 yggT osmotic shock tolerance protein YggT 0.76 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase low > 75
Escherichia fergusonii Becca 0.29 EFB2_00950 hypothetical protein 0.75 EFB2_01826 6-phosphogluconate dehydrogenase, decarboxylating 0.28 68
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_00764 hypothetical protein 0.76 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating low > 73
Escherichia coli BW25113 0.29 b2952 yggT predicted inner membrane protein (NCBI) 0.76 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC99 0.29 KEDOAH_08890 yggT osmotic shock tolerance protein YggT 0.76 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC102 0.29 NIAGMN_17015 yggT osmotic shock tolerance protein YggT 0.76 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase
Escherichia coli ECRC98 0.29 JDDGAC_22880 yggT osmotic shock tolerance protein YggT 0.76 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase low > 86
Escherichia coli ECRC100 0.29 OKFHMN_19250 yggT osmotic shock tolerance protein YggT 0.76 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase low > 80
Escherichia coli ECOR38 0.29 HEPCGN_18555 yggT osmotic shock tolerance protein YggT 0.75 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF3055 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 0.75 GFF3903 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) low > 78
Shewanella oneidensis MR-1 0.28 SO3355 conserved hypothetical protein (NCBI ptt file) 0.44 SO1902 gnd 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) low > 76
Variovorax sp. SCN45 0.28 GFF3880 Cell division integral membrane protein, YggT and half-length relatives 0.57 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) low > 127
Serratia liquefaciens MT49 0.28 IAI46_21420 YggT family protein 0.76 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase
Variovorax sp. OAS795 0.28 ABID97_RS08415 YggT family protein 0.57 ABID97_RS10190 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase low > 91
Rahnella sp. WP5 0.28 EX31_RS02695 YggT family protein 0.76 EX31_RS11475 NADP-dependent phosphogluconate dehydrogenase
Erwinia tracheiphila SCR3 0.27 LU632_RS05455 YggT family protein 0.73 LU632_RS08890 gndA NADP-dependent phosphogluconate dehydrogenase low > 74
Dickeya dadantii 3937 0.27 DDA3937_RS17310 YggT family protein 0.76 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase low > 74
Dickeya dianthicola ME23 0.27 DZA65_RS18445 YggT family protein 0.76 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase low > 75
Dickeya dianthicola 67-19 0.27 HGI48_RS17355 YggT family protein 0.75 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase low > 71
Shewanella amazonensis SB2B 0.27 Sama_2479 protein of unknown function YGGT (RefSeq) 0.44 Sama_1365 6-phosphogluconate dehydrogenase (RefSeq)
Shewanella loihica PV-4 0.27 Shew_1135 protein of unknown function YGGT (RefSeq) 0.44 Shew_2561 6-phosphogluconate dehydrogenase (RefSeq)
Shewanella sp. ANA-3 0.26 Shewana3_1192 protein of unknown function YGGT (RefSeq) 0.44 Shewana3_1677 6-phosphogluconate dehydrogenase (RefSeq) low > 73

Not shown: 28 genomes with orthologs for QEN71_RS03230 only; 17 genomes with orthologs for QEN71_RS20525 only