| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0820 | | transcriptional regulator, LacI family | 1.0 | Psyr_4150 | | Uncharacterized P-loop ATPase protein UPF0042 | 0.31 | 16 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0820 | | transcriptional regulator, LacI family | 1.00 | Psyr_4150 | | Uncharacterized P-loop ATPase protein UPF0042 | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.79 | Pf1N1B4_1147 | | Fructose repressor FruR, LacI family | 0.89 | Pf1N1B4_1083 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | — | — |
| Pseudomonas sp. RS175 | 0.79 | PFR28_00104 | | Catabolite repressor/activator | 0.88 | PFR28_00170 | | RNase adapter protein RapZ | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_3340 | | Fructose repressor FruR, LacI family | 0.90 | Pf6N2E2_3270 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.78 | AO356_07340 | | transcriptional regulator | 0.90 | AO356_07050 | | glmZ(sRNA)-inactivating NTPase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.77 | AO353_05490 | | transcriptional regulator | 0.90 | AO353_05195 | | glmZ(sRNA)-inactivating NTPase | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.77 | PFLU_RS04005 | | catabolite repressor/activator | 0.90 | PFLU_RS04385 | | RNase adapter RapZ | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.77 | PFLU_RS04005 | | catabolite repressor/activator | 0.90 | PFLU_RS04385 | | RNase adapter RapZ | low | > 109 |
| Pseudomonas simiae WCS417 | 0.76 | PS417_03960 | | transcriptional regulator | 0.89 | PS417_04330 | | glmZ(sRNA)-inactivating NTPase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_5077 | | Fructose repressor FruR, LacI family | 0.88 | PfGW456L13_5017 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 87 |
| Pseudomonas putida KT2440 | 0.70 | PP_0792 | | catabolite repressor-activator, DNA-binding transcriptional dual regulator | 0.86 | PP_0949 | | putative ATP-binding protein UPF0042 | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_3356 | | D-fructose-responsive transcription factor | 0.84 | Psest_3316 | | Predicted P-loop-containing kinase | low | > 67 |
| Vibrio cholerae E7946 ATCC 55056 | 0.43 | CSW01_16835 | | catabolite repressor/activator | 0.45 | CSW01_12830 | | RNase adaptor protein RapZ | low | > 62 |
| Pantoea sp. MT58 | 0.38 | IAI47_15980 | | catabolite repressor/activator | 0.46 | IAI47_17200 | | RNase adapter RapZ | low | > 76 |
| Escherichia coli Nissle 1917 | 0.37 | ECOLIN_RS00430 | | catabolite repressor/activator | 0.46 | ECOLIN_RS18440 | | RNase adapter RapZ | low | > 55 |
| Escherichia coli BL21 | 0.37 | ECD_00081 | | transcriptional repressor-activator for carbon metabolism | 0.46 | ECD_03070 | | adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase | 0.42 | 40 |
| Escherichia fergusonii Becca | 0.37 | EFB2_03967 | | Catabolite repressor/activator | 0.46 | EFB2_00618 | | RNase adapter protein RapZ | low | > 86 |
| Klebsiella michiganensis M5al | 0.37 | BWI76_RS04705 | | DNA-binding transcriptional regulator FruR | 0.46 | BWI76_RS25280 | | RNase adaptor protein RapZ | low | > 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.37 | OHPLBJKB_03579 | | Catabolite repressor/activator | 0.46 | OHPLBJKB_00495 | | RNase adapter protein RapZ | low | > 73 |
| Escherichia coli BW25113 | 0.37 | b0080 | fruR | DNA-binding transcriptional dual regulator (NCBI) | 0.46 | b3205 | yhbJ | hypothetical protein (NCBI) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.37 | EX28DRAFT_3675 | | transcriptional regulator, LacI family | 0.46 | EX28DRAFT_3259 | | Predicted P-loop-containing kinase | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.37 | LU632_RS02900 | cra | catabolite repressor/activator | 0.46 | LU632_RS21295 | rapZ | RNase adapter RapZ | low | > 74 |
| Enterobacter sp. TBS_079 | 0.37 | MPMX20_00773 | | Catabolite repressor/activator | 0.46 | MPMX20_04111 | | RNase adapter protein RapZ | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.37 | HER17_RS03105 | | catabolite repressor/activator | 0.46 | HER17_RS20075 | | RNase adapter RapZ | low | > 75 |
| Rahnella sp. WP5 | 0.37 | EX31_RS03655 | | catabolite repressor/activator | 0.46 | EX31_RS12385 | | RNase adapter RapZ | low | > 89 |
| Escherichia coli ECRC101 | 0.37 | MCAODC_01200 | cra | catabolite repressor/activator | 0.46 | MCAODC_08445 | rapZ | RNase adapter RapZ | low | > 87 |
| Escherichia coli ECRC99 | 0.37 | KEDOAH_17470 | cra | catabolite repressor/activator | 0.46 | KEDOAH_10225 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_08665 | cra | catabolite repressor/activator | 0.46 | HEPCGN_16800 | rapZ | RNase adapter RapZ | low | > 87 |
| Escherichia coli ECRC102 | 0.37 | NIAGMN_08535 | cra | catabolite repressor/activator | 0.46 | NIAGMN_15685 | rapZ | RNase adapter RapZ | — | — |
| Escherichia coli ECRC100 | 0.37 | OKFHMN_10685 | cra | catabolite repressor/activator | 0.46 | OKFHMN_17925 | rapZ | RNase adapter RapZ | low | > 80 |
| Escherichia coli ECRC98 | 0.37 | JDDGAC_14280 | cra | catabolite repressor/activator | 0.46 | JDDGAC_21550 | rapZ | RNase adapter RapZ | low | > 86 |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_03030 | cra | catabolite repressor/activator | 0.46 | NOLOHH_09725 | rapZ | RNase adapter RapZ | low | > 75 |
| Serratia liquefaciens MT49 | 0.37 | IAI46_03385 | | catabolite repressor/activator | 0.46 | IAI46_22485 | | RNase adapter RapZ | low | > 86 |
| Escherichia coli ECRC62 | 0.37 | BNILDI_08580 | cra | catabolite repressor/activator | 0.46 | BNILDI_01810 | rapZ | RNase adapter RapZ | low | > 75 |
| Dickeya dianthicola 67-19 | 0.37 | HGI48_RS18030 | | catabolite repressor/activator | 0.46 | HGI48_RS01430 | | RNase adapter RapZ | low | > 71 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.37 | GFF158 | | Fructose repressor FruR, LacI family | 0.46 | GFF2949 | | Hypothetical ATP-binding protein UPF0042, contains P-loop | low | > 78 |
| Dickeya dianthicola ME23 | 0.37 | DZA65_RS19175 | | catabolite repressor/activator | 0.46 | DZA65_RS01495 | | RNase adapter RapZ | low | > 75 |
| Dickeya dadantii 3937 | 0.37 | DDA3937_RS18095 | | catabolite repressor/activator | 0.46 | DDA3937_RS01515 | | RNase adapter RapZ | low | > 74 |
Not shown: 3 genomes with orthologs for Psyr_0820 only; 44 genomes with orthologs for Psyr_4150 only