| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0003 | | DNA replication and repair protein RecF | 1.0 | Psyr_3876 | | amino acid ABC transporter membrane protein 2, PAAT family | 0.37 | 11 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0003 | | DNA replication and repair protein RecF | 1.00 | Psyr_3876 | | amino acid ABC transporter membrane protein 2, PAAT family | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_10480 | | recombinase RecF | 0.91 | AO353_16960 | | amino acid ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_1927 | | DNA recombination and repair protein RecF | 0.90 | Pf1N1B4_3177 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.93 | PFLU_RS00015 | | DNA replication/repair protein RecF | 0.91 | PFLU_RS06470 | | ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.93 | PFLU_RS00015 | | DNA replication/repair protein RecF | 0.91 | PFLU_RS06470 | | ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.93 | AO356_11635 | | recombinase RecF | 0.91 | AO356_05505 | | ABC transporter for L-Lysine, permease component 2 (from data) | low | > 104 |
| Pseudomonas sp. DMC3 | 0.93 | GFF578 | | DNA replication and repair protein RecF | 0.91 | GFF2145 | | Histidine transport system permease protein HisM | low | > 89 |
| Pseudomonas orientalis W4I3 | 0.93 | QF045_RS02960 | | DNA replication/repair protein RecF | 0.92 | QF045_RS09250 | | ABC transporter permease | low | > 93 |
| Pseudomonas lactucae CFBP13502 | 0.93 | GEMAOFIL_00183 | | DNA replication and repair protein RecF | 0.92 | GEMAOFIL_01451 | | Histidine transport system permease protein HisM | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.93 | COO64_RS02120 | recF | DNA replication/repair protein RecF | 0.89 | COO64_RS16950 | | ABC transporter permease | low | > 93 |
| Pseudomonas sp. RS175 | 0.93 | PFR28_04593 | | DNA replication and repair protein RecF | 0.90 | PFR28_00505 | | Histidine transport system permease protein HisM | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_4197 | | DNA recombination and repair protein RecF | 0.90 | Pf6N2E2_2960 | | ABC transporter for L-Lysine, permease component 2 (from data) | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_664 | | DNA recombination and repair protein RecF | 0.91 | PfGW456L13_4637 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_00015 | | recombinase RecF | 0.92 | PS417_06405 | | amino acid ABC transporter permease | low | > 88 |
| Pseudomonas aeruginosa PA14 | 0.82 | IKLFDK_25545 | | DNA replication/repair protein RecF | 0.65 | IKLFDK_14860 | | amino acid ABC transporter permease | low | > 98 |
| Pectobacterium carotovorum WPP14 | 0.39 | HER17_RS00015 | | DNA replication/repair protein RecF | 0.63 | HER17_RS07040 | | ABC transporter permease | low | > 75 |
| Serratia liquefaciens MT49 | 0.39 | IAI46_00015 | | DNA replication/repair protein RecF | 0.63 | IAI46_17790 | | ABC transporter permease | low | > 87 |
| Dickeya dadantii 3937 | 0.38 | DDA3937_RS21285 | | DNA replication/repair protein RecF | 0.62 | DDA3937_RS14415 | | ABC transporter permease | low | > 74 |
| Rahnella sp. WP5 | 0.38 | EX31_RS05975 | | DNA replication/repair protein RecF | 0.65 | EX31_RS19550 | | ABC transporter permease | low | > 89 |
| Dickeya dianthicola 67-19 | 0.38 | HGI48_RS00015 | | DNA replication/repair protein RecF | 0.61 | HGI48_RS14385 | | ABC transporter permease | low | > 71 |
| Dickeya dianthicola ME23 | 0.38 | DZA65_RS00015 | | DNA replication/repair protein RecF | 0.61 | DZA65_RS15315 | | ABC transporter permease | low | > 75 |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS21310 | | DNA replication/repair protein RecF | 0.64 | ECOLIN_RS13380 | | ABC transporter permease | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.38 | OHPLBJKB_00003 | | DNA replication and repair protein RecF | 0.63 | OHPLBJKB_01398 | | Histidine transport system permease protein HisM | low | > 74 |
| Escherichia coli BL21 | 0.38 | ECD_03583 | | gap repair protein | 0.64 | ECD_02232 | | histidine ABC transporter permease | low | > 61 |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_07165 | recF | DNA replication/repair protein RecF | 0.63 | NOLOHH_14360 | hisM | Histidine transport system permease protein HisM | low | > 76 |
| Escherichia coli ECRC101 | 0.38 | MCAODC_05535 | recF | DNA replication/repair protein RecF | 0.63 | MCAODC_13780 | hisM | Histidine transport system permease protein HisM | low | > 87 |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_18645 | recF | DNA replication/repair protein RecF | 0.63 | JDDGAC_26700 | hisM | Histidine transport system permease protein HisM | low | > 87 |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_12780 | recF | DNA replication/repair protein RecF | 0.63 | NIAGMN_20510 | hisM | Histidine transport system permease protein HisM | low | > 80 |
| Escherichia fergusonii Becca | 0.38 | EFB2_00003 | | DNA replication and repair protein RecF | 0.64 | EFB2_01551 | | Histidine transport system permease protein HisM | low | > 86 |
| Escherichia coli ECRC62 | 0.38 | BNILDI_04365 | recF | DNA replication/repair protein RecF | 0.63 | BNILDI_13280 | hisM | Histidine transport system permease protein HisM | low | > 75 |
| Escherichia coli BW25113 | 0.38 | b3700 | recF | recombination protein F (NCBI) | 0.64 | b2307 | hisM | histidine/lysine/arginine/ornithine transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_13125 | recF | DNA replication/repair protein RecF | 0.63 | KEDOAH_05455 | hisM | Histidine transport system permease protein HisM | — | — |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_13720 | recF | DNA replication/repair protein RecF | 0.63 | HEPCGN_21935 | hisM | Histidine transport system permease protein HisM | low | > 88 |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_15025 | recF | DNA replication/repair protein RecF | 0.63 | OKFHMN_22740 | hisM | Histidine transport system permease protein HisM | low | > 79 |
| Enterobacter asburiae PDN3 | 0.37 | EX28DRAFT_3987 | | DNA replication and repair protein RecF | 0.63 | EX28DRAFT_0297 | | amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family | low | > 76 |
| Klebsiella pneumoniae MKP103 | 0.37 | KDGMDA_08670 | | DNA replication/repair protein RecF | 0.63 | KDGMDA_27160 | | histidine ABC transporter permease HisM | low | > 95 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.37 | GFF1756 | | DNA recombination and repair protein RecF | 0.63 | GFF1916 | | Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.37 | MPMX20_00003 | | DNA replication and repair protein RecF | 0.63 | MPMX20_03242 | | Histidine transport system permease protein HisM | low | > 85 |
| Pantoea sp. MT58 | 0.37 | IAI47_00015 | | DNA replication/repair protein RecF | 0.66 | IAI47_06295 | | ABC transporter permease | low | > 76 |
| Klebsiella michiganensis M5al | 0.37 | BWI76_RS00010 | | DNA replication and repair protein RecF | 0.62 | BWI76_RS20325 | | histidine/lysine/arginine/ornithine ABC transporter permease HisM | low | > 92 |
| Erwinia amylovora T8 | 0.36 | OLJFJH_05150 | | DNA replication/repair protein RecF | 0.64 | OLJFJH_11300 | | amino acid ABC transporter permease | low | > 58 |
| Pantoea agglomerans CFBP13505 P0401 | 0.36 | PagCFBP13505_RS19305 | | DNA replication/repair protein RecF | 0.66 | PagCFBP13505_RS00250 | | ABC transporter permease subunit | low | > 74 |
| Acinetobacter baumannii LAC-4 | 0.30 | RR41_RS00015 | | DNA replication/repair protein RecF | 0.69 | RR41_RS06090 | | ABC transporter permease | low | > 55 |
| Dinoroseobacter shibae DFL-12 | 0.11 | Dshi_3375 | | SMC domain protein (RefSeq) | 0.25 | Dshi_2224 | | polar amino acid ABC transporter, inner membrane subunit (RefSeq) | low | > 64 |
Not shown: 55 genomes with orthologs for Psyr_0003 only; 8 genomes with orthologs for Psyr_3876 only