Conservation of cofitness between Psyr_0820 and Psyr_3856 in Pseudomonas syringae pv. syringae B728a

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0820 transcriptional regulator, LacI family 1.0 Psyr_3856 Helicase c2 0.31 14
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0820 transcriptional regulator, LacI family 1.00 Psyr_3856 Helicase c2 low > 86
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_1147 Fructose repressor FruR, LacI family 0.92 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 — —
Pseudomonas sp. RS175 0.79 PFR28_00104 Catabolite repressor/activator 0.93 PFR28_00520 ATP-dependent DNA helicase DinG low > 88
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_3340 Fructose repressor FruR, LacI family 0.93 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 low > 103
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_07340 transcriptional regulator 0.93 AO356_05425 ATP-dependent DNA helicase DinG low > 104
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_05490 transcriptional regulator 0.93 AO353_17020 ATP-dependent DNA helicase DinG low > 101
Pseudomonas fluorescens SBW25 0.77 PFLU_RS04005 catabolite repressor/activator 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS04005 catabolite repressor/activator 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG low > 109
Pseudomonas simiae WCS417 0.76 PS417_03960 transcriptional regulator 0.93 PS417_06510 ATP-dependent DNA helicase DinG — —
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_5077 Fructose repressor FruR, LacI family 0.93 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 low > 87
Pseudomonas putida KT2440 0.70 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator 0.88 PP_1125 putative Helicase low > 96
Pseudomonas stutzeri RCH2 0.58 Psest_3356 D-fructose-responsive transcription factor 0.88 Psest_2857 Rad3-related DNA helicases low > 67
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_16835 catabolite repressor/activator 0.30 CSW01_09290 ATP-dependent DNA helicase DinG low > 62
Pantoea sp. MT58 0.38 IAI47_15980 catabolite repressor/activator 0.20 IAI47_13295 ATP-dependent DNA helicase DinG low > 76
Escherichia coli BW25113 0.37 b0080 fruR DNA-binding transcriptional dual regulator (NCBI) 0.22 b0799 dinG ATP-dependent DNA helicase (NCBI) low > 76
Klebsiella michiganensis M5al 0.37 BWI76_RS04705 DNA-binding transcriptional regulator FruR 0.22 BWI76_RS08920 ATP-dependent DNA helicase DinG low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03579 Catabolite repressor/activator 0.22 OHPLBJKB_02914 putative ATP-dependent helicase DinG low > 73
Escherichia fergusonii Becca 0.37 EFB2_03967 Catabolite repressor/activator 0.22 EFB2_03306 ATP-dependent DNA helicase DinG low > 86
Escherichia coli BL21 0.37 ECD_00081 transcriptional repressor-activator for carbon metabolism 0.22 ECD_00766 ATP-dependent DNA helicase low > 61
Escherichia coli Nissle 1917 0.37 ECOLIN_RS00430 catabolite repressor/activator 0.22 ECOLIN_RS04255 ATP-dependent DNA helicase DinG — —
Enterobacter sp. TBS_079 0.37 MPMX20_00773 Catabolite repressor/activator 0.22 MPMX20_01426 ATP-dependent DNA helicase DinG low > 85
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3675 transcriptional regulator, LacI family 0.22 EX28DRAFT_2193 Rad3-related DNA helicases low > 76
Pectobacterium carotovorum WPP14 0.37 HER17_RS03105 catabolite repressor/activator 0.21 HER17_RS13230 ATP-dependent DNA helicase DinG low > 75
Erwinia tracheiphila SCR3 0.37 LU632_RS02900 cra catabolite repressor/activator 0.20 LU632_RS09400 dinG ATP-dependent DNA helicase DinG low > 74
Escherichia coli ECOR38 0.37 HEPCGN_08665 cra catabolite repressor/activator 0.22 HEPCGN_01765 dinG ATP-dependent DNA helicase DinG low > 87
Escherichia coli ECRC101 0.37 MCAODC_01200 cra catabolite repressor/activator 0.22 MCAODC_25495 dinG ATP-dependent DNA helicase DinG low > 87
Escherichia coli ECRC62 0.37 BNILDI_08580 cra catabolite repressor/activator 0.22 BNILDI_20910 dinG ATP-dependent DNA helicase DinG low > 75
Serratia liquefaciens MT49 0.37 IAI46_03385 catabolite repressor/activator 0.20 IAI46_07445 ATP-dependent DNA helicase DinG low > 86
Escherichia coli ECRC100 0.37 OKFHMN_10685 cra catabolite repressor/activator 0.22 OKFHMN_06280 dinG ATP-dependent DNA helicase DinG low > 80
Escherichia coli ECRC99 0.37 KEDOAH_17470 cra catabolite repressor/activator 0.22 KEDOAH_21630 dinG ATP-dependent DNA helicase DinG — —
Escherichia coli ECRC98 0.37 JDDGAC_14280 cra catabolite repressor/activator 0.22 JDDGAC_09915 dinG ATP-dependent DNA helicase DinG low > 86
Rahnella sp. WP5 0.37 EX31_RS03655 catabolite repressor/activator 0.20 EX31_RS19020 ATP-dependent DNA helicase DinG low > 89
Escherichia coli ECOR27 0.37 NOLOHH_03030 cra catabolite repressor/activator 0.22 NOLOHH_22630 dinG ATP-dependent DNA helicase DinG low > 75
Escherichia coli ECRC102 0.37 NIAGMN_08535 cra catabolite repressor/activator 0.22 NIAGMN_04325 dinG ATP-dependent DNA helicase DinG — —
Dickeya dianthicola 67-19 0.37 HGI48_RS18030 catabolite repressor/activator 0.21 HGI48_RS08850 ATP-dependent DNA helicase DinG low > 71
Dickeya dianthicola ME23 0.37 DZA65_RS19175 catabolite repressor/activator 0.21 DZA65_RS09155 ATP-dependent DNA helicase DinG low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF158 Fructose repressor FruR, LacI family 0.22 GFF697 ATP-dependent helicase DinG/Rad3 low > 78
Dickeya dadantii 3937 0.37 DDA3937_RS18095 catabolite repressor/activator 0.21 DDA3937_RS08765 ATP-dependent DNA helicase DinG low > 74

Not shown: 3 genomes with orthologs for Psyr_0820 only; 25 genomes with orthologs for Psyr_3856 only