Conservation of cofitness between Psyr_1709 and Psyr_3742 in Pseudomonas syringae pv. syringae B728a

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1709 Major facilitator superfamily 1.0 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.36 2
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1709 Major facilitator superfamily 1.00 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 low > 86
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_24590 MFS transporter 0.74 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 104
Pseudomonas sp. RS175 0.92 PFR28_01580 Quinolone resistance transporter 0.73 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 88
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_3318 Nitrate/nitrite transporter 0.74 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 87
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_610 Nitrate/nitrite transporter 0.75 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 103
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_4622 Nitrate/nitrite transporter 0.74 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 87
Pseudomonas fluorescens SBW25 0.88 PFLU_RS11630 MFS transporter 0.72 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS11630 MFS transporter 0.72 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas simiae WCS417 0.88 PS417_11005 L-arabinose transporter (from data) 0.73 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 88
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS33945 MFS transporter 0.20 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 128
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS01525 MFS transporter 0.27 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS31040 MFS transporter 0.27 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 153
Variovorax sp. SCN45 0.42 GFF1379 Uncharacterized MFS-type transporter 0.15 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 127
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_00981 D-galactonate transporter 0.28 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 103
Caulobacter crescentus NA1000 0.41 CCNA_02439 transporter, major facilitator superfamily 0.16 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC low > 66
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_02439 transporter, major facilitator superfamily 0.16 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC low > 67
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS09995 membrane protein 0.28 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 109
Paraburkholderia graminis OAS925 0.39 ABIE53_002220 ACS family tartrate transporter-like MFS transporter 0.28 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 113
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS22270 MFS transporter 0.15 HSERO_RS23825 hypothetical protein low > 78
Pectobacterium carotovorum WPP14 0.34 HER17_RS17310 MFS transporter 0.28 HER17_RS06960 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF1851 L-rhamnonate transporter (predicted by genome context) 0.31 GFF1945 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 78
Escherichia fergusonii Becca 0.33 EFB2_01610 Inner membrane transport protein RhmT 0.31 EFB2_01534 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 86
Escherichia coli ECRC102 0.33 NIAGMN_20800 MFS transporter 0.32 NIAGMN_20415 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Escherichia coli Nissle 1917 0.33 ECOLIN_RS13090 MFS transporter 0.31 ECOLIN_RS13465 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 55
Escherichia coli ECRC98 0.33 JDDGAC_26995 MFS transporter 0.32 JDDGAC_26600 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 86
Escherichia coli ECOR38 0.33 HEPCGN_22275 MFS transporter 0.32 HEPCGN_21845 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.41 66
Escherichia coli BW25113 0.33 b2246 b2246 putative transport protein (VIMSS) 0.32 b2324 b2324 putative peptidase (VIMSS) low > 76

Not shown: 3 genomes with orthologs for Psyr_1709 only; 37 genomes with orthologs for Psyr_3742 only