Conservation of cofitness between Psyr_0039 and Psyr_3097 in Pseudomonas syringae pv. syringae B728a

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0039 luciferase 1.0 Psyr_3097 Peptidase U32 0.39 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0039 luciferase 1.00 Psyr_3097 Peptidase U32 low > 86
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS00205 LLM class flavin-dependent oxidoreductase 0.87 PFLU_RS15170 U32 family peptidase low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS00205 LLM class flavin-dependent oxidoreductase 0.87 PFLU_RS15170 U32 family peptidase low > 109
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_4053 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 0.89 Pf6N2E2_1358 Putative collagenase low > 103
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1836 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 0.88 Pf1N1B4_5107 Putative collagenase low > 87
Pseudomonas simiae WCS417 0.86 PS417_00210 hypothetical protein 0.88 PS417_13670 protease low > 88
Pseudomonas sp. RS175 0.86 PFR28_04710 hypothetical protein 0.88 PFR28_01648 23S rRNA 5-hydroxycytidine synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_10940 hypothetical protein 0.89 AO356_25280 protease low > 104
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_571 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 0.88 PfGW456L13_3578 Putative collagenase low > 87
Pseudomonas putida KT2440 0.84 PP_0088 putative alkanal monooxygenase 0.86 PP_3497 putative peptidase low > 96
Pseudomonas stutzeri RCH2 0.75 Psest_0077 luciferase family oxidoreductase, group 1 0.81 Psest_2765 Collagenase and related proteases low > 67
Pseudomonas sp. S08-1 0.71 OH686_12400 Luciferase-like monooxygenase YhbW 0.86 OH686_20270 Uncharacterized protease YdcP low > 80
Shewanella sp. ANA-3 0.58 Shewana3_3090 luciferase family protein (RefSeq) 0.43 Shewana3_0800 peptidase U32 (RefSeq) low > 73
Acidovorax sp. GW101-3H11 0.58 Ac3H11_4052 Bacterial luciferase family protein 0.50 Ac3H11_551 Probable collagenase (EC 3.4.24.3) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4577 Bacterial luciferase family protein 0.50 GFF4570 Probable collagenase (EC 3.4.24.3) 0.40 21
Dechlorosoma suillum PS 0.53 Dsui_1879 luciferase family oxidoreductase, group 1 0.48 Dsui_2754 collagenase-like protease low > 51
Klebsiella michiganensis M5al 0.52 BWI76_RS24980 LLM class flavin-dependent oxidoreductase 0.68 BWI76_RS13375 protease low > 92
Enterobacter asburiae PDN3 0.52 EX28DRAFT_3209 luciferase family oxidoreductase, group 1 0.69 EX28DRAFT_1222 Collagenase and related proteases low > 76
Enterobacter sp. TBS_079 0.51 MPMX20_04064 hypothetical protein 0.69 MPMX20_02244 23S rRNA 5-hydroxycytidine synthase low > 85
Escherichia coli ECOR38 0.51 HEPCGN_17040 yhbW luciferase-like monooxygenase 0.69 HEPCGN_26220 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase low > 87
Escherichia coli Nissle 1917 0.51 ECOLIN_RS18150 luciferase-like monooxygenase 0.69 ECOLIN_RS08280 23S rRNA 5-hydroxycytidine C2501 synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00540 hypothetical protein 0.68 OHPLBJKB_02280 putative protease YdcP low > 73
Escherichia coli ECRC62 0.51 BNILDI_01565 yhbW luciferase-like monooxygenase 0.68 BNILDI_17725 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase low > 75
Escherichia fergusonii Becca 0.51 EFB2_00663 hypothetical protein 0.69 EFB2_02547 23S rRNA 5-hydroxycytidine synthase low > 86
Escherichia coli BL21 0.51 ECD_03027 putative luciferase-like monooxygenase 0.68 ECD_01393 putative peptidase — —
Escherichia coli ECOR27 0.51 NOLOHH_09965 yhbW luciferase-like monooxygenase 0.68 NOLOHH_19275 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase low > 75
Escherichia coli BW25113 0.51 b3160 yhbW predicted enzyme (NCBI) 0.69 b1435 ydcP putative collagenase (VIMSS) low > 76
Escherichia coli ECRC99 0.50 KEDOAH_09985 yhbW luciferase-like monooxygenase 0.68 KEDOAH_26840 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase — —
Escherichia coli ECRC100 0.50 OKFHMN_18165 yhbW luciferase-like monooxygenase 0.68 OKFHMN_01600 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase low > 80
Escherichia coli ECRC98 0.50 JDDGAC_21790 yhbW luciferase-like monooxygenase 0.68 JDDGAC_04090 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase low > 86
Escherichia coli ECRC101 0.50 MCAODC_08685 yhbW luciferase-like monooxygenase 0.68 MCAODC_16340 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase low > 87
Escherichia coli ECRC102 0.50 NIAGMN_15925 yhbW luciferase-like monooxygenase 0.68 NIAGMN_25735 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF1508 Luciferase-like monooxygenase (EC 1.14.-.-) 0.66 GFF2594 putative collagenase low > 78

Not shown: 48 genomes with orthologs for Psyr_0039 only; 9 genomes with orthologs for Psyr_3097 only