Conservation of cofitness between Psyr_1567 and Psyr_2884 in Pseudomonas syringae pv. syringae B728a

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1567 Uncharacterized conserved protein UCP006173 1.0 Psyr_2884 xylose-binding protein 0.45 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1567 Uncharacterized conserved protein UCP006173 1.00 Psyr_2884 xylose-binding protein low > 86
Pseudomonas sp. RS175 0.92 PFR28_00716 hypothetical protein 0.93 PFR28_02349 D-xylose-binding periplasmic protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_04400 hypothetical protein 0.93 AO356_28505 sugar ABC transporter substrate-binding protein low > 104
Pseudomonas orientalis W4I3 0.91 QF045_RS10050 YcgN family cysteine cluster protein 0.91 QF045_RS13260 D-xylose ABC transporter substrate-binding protein low > 93
Pseudomonas simiae WCS417 0.91 PS417_07400 hypothetical protein 0.90 PS417_10940 sugar ABC transporter substrate-binding protein low > 88
Pseudomonas lactucae CFBP13502 0.91 GEMAOFIL_01613 hypothetical protein 0.91 GEMAOFIL_02457 D-xylose-binding periplasmic protein low > 96
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2723 YcgN (Fragment) 0.93 Pf6N2E2_1455 Xylose ABC transporter, periplasmic xylose-binding protein XylF low > 103
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS07485 YcgN family cysteine cluster protein 0.90 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.91 PFLU_RS07485 YcgN family cysteine cluster protein 0.90 PFLU_RS11300 D-xylose ABC transporter substrate-binding protein low > 109
Pseudomonas sp. DMC3 0.89 GFF2314 hypothetical protein 0.91 GFF1156 D-xylose-binding periplasmic protein low > 89
Pseudomonas sp. BP01 0.80 JOY50_RS01535 YcgN family cysteine cluster protein 0.23 JOY50_RS07825 chvE multiple monosaccharide ABC transporter substrate-binding protein low > 84
Sinorhizobium meliloti 1021 0.55 SMc00064 hypothetical protein 0.33 SM_b20902 sugar uptake ABC transporter substrate-binding protein precursor low > 103
Agrobacterium fabrum C58 0.54 Atu0932 hypothetical protein 0.30 Atu3576 xylose ABC transporter substrate-binding protein low > 89
Rhizobium sp. OAE497 0.53 ABIE40_RS05495 YcgN family cysteine cluster protein 0.36 ABIE40_RS14020 D-xylose ABC transporter substrate-binding protein low > 107
Klebsiella pneumoniae MKP103 0.51 KDGMDA_25080 YcgN family cysteine cluster protein 0.62 KDGMDA_07780 D-xylose ABC transporter substrate-binding protein low > 95
Enterobacter sp. TBS_079 0.51 MPMX20_02704 hypothetical protein 0.59 MPMX20_00164 D-xylose-binding periplasmic protein low > 85
Escherichia coli ECRC102 0.50 NIAGMN_27975 ycgN YcgN family cysteine cluster protein 0.59 NIAGMN_13710 xylF D-xylose ABC transporter substrate-binding protein low > 80
Escherichia coli ECOR38 0.50 HEPCGN_24695 ycgN YcgN family cysteine cluster protein 0.59 HEPCGN_14835 xylF D-xylose ABC transporter substrate-binding protein low > 88
Escherichia coli BW25113 0.50 b1181 ycgN conserved protein (RefSeq) 0.59 b3566 xylF D-xylose transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_02510 hypothetical protein 0.59 OHPLBJKB_00138 D-xylose-binding periplasmic protein low > 74
Escherichia coli ECRC100 0.50 OKFHMN_28245 ycgN YcgN family cysteine cluster protein 0.59 OKFHMN_15950 xylF D-xylose ABC transporter substrate-binding protein — —
Klebsiella michiganensis M5al 0.50 BWI76_RS17765 hypothetical protein 0.61 BWI76_RS27030 D-xylose transporter subunit XylF low > 92
Escherichia coli ECRC99 0.50 KEDOAH_25260 ycgN YcgN family cysteine cluster protein 0.59 KEDOAH_12200 xylF D-xylose ABC transporter substrate-binding protein — —
Escherichia coli ECOR27 0.50 NOLOHH_20775 ycgN YcgN family cysteine cluster protein 0.59 NOLOHH_07895 xylF D-xylose ABC transporter substrate-binding protein low > 76
Escherichia coli ECRC98 0.50 JDDGAC_06265 ycgN YcgN family cysteine cluster protein 0.59 JDDGAC_19580 xylF D-xylose ABC transporter substrate-binding protein low > 87
Escherichia coli ECRC101 0.50 MCAODC_21925 ycgN YcgN family cysteine cluster protein 0.59 MCAODC_06465 xylF D-xylose ABC transporter substrate-binding protein low > 87
Escherichia coli Nissle 1917 0.50 ECOLIN_RS07145 YcgN family cysteine cluster protein 0.59 ECOLIN_RS20395 D-xylose ABC transporter substrate-binding protein — —
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0761 Uncharacterized conserved protein 0.59 EX28DRAFT_3831 D-xylose ABC transporter, substrate-binding protein low > 76
Pectobacterium carotovorum WPP14 0.50 HER17_RS11240 YcgN family cysteine cluster protein 0.59 HER17_RS21080 D-xylose ABC transporter substrate-binding protein low > 75
Escherichia fergusonii Becca 0.50 EFB2_02750 hypothetical protein 0.59 EFB2_00241 D-xylose-binding periplasmic protein low > 86
Escherichia coli BL21 0.50 ECD_01156 UPF0153 family cysteine cluster protein 0.59 ECD_03418 D-xylose transporter subunit — —
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS02705 YcgN family cysteine cluster protein 0.60 PagCFBP13505_RS19150 D-xylose ABC transporter substrate-binding protein low > 74
Pantoea sp. MT58 0.49 IAI47_08870 YcgN family cysteine cluster protein 0.60 IAI47_00190 D-xylose ABC transporter substrate-binding protein low > 76
Serratia liquefaciens MT49 0.48 IAI46_14490 YcgN family cysteine cluster protein 0.61 IAI46_00285 D-xylose ABC transporter substrate-binding protein low > 87
Phaeobacter inhibens DSM 17395 0.48 PGA1_c25000 Uncharacterized conserved protein 0.33 PGA1_262p00430 glucose transporter, periplasmic substrate-binding component (from data) low > 62
Dickeya dadantii 3937 0.47 DDA3937_RS11190 YcgN family cysteine cluster protein 0.61 DDA3937_RS20930 D-xylose ABC transporter substrate-binding protein low > 74
Dickeya dianthicola ME23 0.47 DZA65_RS11570 YcgN family cysteine cluster protein 0.61 DZA65_RS00315 D-xylose ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.46 HGI48_RS11225 YcgN family cysteine cluster protein 0.61 HGI48_RS00315 D-xylose ABC transporter substrate-binding protein low > 71
Dinoroseobacter shibae DFL-12 0.44 Dshi_2928 protein of unknown function UPF0153 (RefSeq) 0.30 Dshi_2000 xylitol ABC transporter, periplasmic substrate-binding protein (from data) low > 64
Rahnella sp. WP5 0.42 EX31_RS10560 YcgN family cysteine cluster protein 0.59 EX31_RS09760 D-xylose ABC transporter substrate-binding protein low > 89

Not shown: 34 genomes with orthologs for Psyr_1567 only; 17 genomes with orthologs for Psyr_2884 only