| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_3511 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | 1.0 | Psyr_2243 | | Endoribonuclease L-PSP | 0.43 | 5 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_3511 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | 1.00 | Psyr_2243 | | Endoribonuclease L-PSP | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.77 | AO356_27280 | | XRE family transcriptional regulator | 0.27 | AO356_22385 | | enamine deaminase RidA | low | > 104 |
| Pseudomonas sp. S08-1 | 0.73 | OH686_04665 | | Two-component system response regulator QseB | 0.26 | OH686_18475 | | RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein | low | > 80 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_02328 | | Transcriptional regulatory protein QseB | 0.27 | PFR28_02561 | | RutC family protein YjgH | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_1539 | | Two-component system response regulator QseB | 0.26 | Pf6N2E2_347 | | Endoribonuclease L-PSP | low | > 103 |
| Pseudomonas simiae WCS417 | 0.70 | PS417_13595 | | XRE family transcriptional regulator | 0.76 | PS417_07990 | | endoribonuclease L-PSP | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.69 | Psest_3476 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 0.26 | Psest_3002 | | Putative translation initiation inhibitor, yjgF family | low | > 67 |
| Paraburkholderia graminis OAS925 | 0.62 | ABIE53_003418 | | two-component system response regulator QseB | 0.26 | ABIE53_001473 | | enamine deaminase RidA (YjgF/YER057c/UK114 family) | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.62 | H281DRAFT_04180 | | two component transcriptional regulator, winged helix family | 0.78 | H281DRAFT_01492 | | Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family | low | > 103 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS14955 | | response regulator | 0.26 | ABID97_RS28685 | | RidA family protein | low | > 91 |
| Variovorax sp. SCN45 | 0.56 | GFF1175 | | Two-component system response regulator QseB | 0.27 | GFF138 | | RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein | low | > 127 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS21985 | | transcriptional regulator | 0.43 | HSERO_RS06570 | | endoribonuclease L-PSP | low | > 78 |
| Ralstonia sp. UNC404CL21Col | 0.54 | ABZR87_RS22890 | | response regulator transcription factor | 0.23 | ABZR87_RS16800 | | RidA family protein | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS37390 | | XRE family transcriptional regulator | 0.34 | RR42_RS24575 | | endoribonuclease L-PSP | low | > 128 |
| Dechlorosoma suillum PS | 0.53 | Dsui_2248 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | 0.24 | Dsui_3425 | | putative translation initiation inhibitor, yjgF family | — | — |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS17155 | | DNA-binding response regulator | 0.33 | UW163_RS18330 | | RidA family protein | — | — |
| Enterobacter asburiae PDN3 | 0.49 | EX28DRAFT_3057 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 0.24 | EX28DRAFT_0570 | | Putative translation initiation inhibitor, yjgF family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_03863 | | Transcriptional regulatory protein QseB | 0.33 | MPMX20_02480 | | RutC family protein YjgH | low | > 85 |
| Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS01270 | | response regulator | 0.24 | ABZR86_RS09760 | | RidA family protein | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF1469 | | Transcriptional regulatory protein basR/pmrA | 0.31 | GFF2536 | | RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein | low | > 78 |
| Lysobacter sp. OAE881 | 0.47 | ABIE51_RS00875 | | response regulator transcription factor | 0.29 | ABIE51_RS10300 | | RidA family protein | low | > 62 |
| Escherichia coli ECRC101 | 0.47 | MCAODC_03080 | basR | two-component system response regulator BasR | 0.29 | MCAODC_02365 | ridA | Endoribonuclease L-PSP | low | > 87 |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_10415 | basR | two-component system response regulator BasR | 0.29 | NIAGMN_09710 | ridA | Endoribonuclease L-PSP | — | — |
| Escherichia coli ECRC62 | 0.47 | BNILDI_06655 | basR | two-component system response regulator BasR | 0.29 | BNILDI_07390 | yjgH | RutC family protein YjgH | low | > 75 |
| Escherichia coli ECOR27 | 0.47 | NOLOHH_04835 | basR | two-component system response regulator BasR | 0.29 | NOLOHH_04120 | yjgH | RutC family protein YjgH | low | > 75 |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_15595 | basR | two-component system response regulator BasR | 0.29 | KEDOAH_16295 | ridA | Endoribonuclease L-PSP | — | — |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_16205 | basR | two-component system response regulator BasR | 0.29 | JDDGAC_15500 | ridA | Endoribonuclease L-PSP | low | > 86 |
| Escherichia coli ECRC100 | 0.47 | OKFHMN_12570 | basR | two-component system response regulator BasR | 0.29 | OKFHMN_11860 | ridA | Endoribonuclease L-PSP | low | > 80 |
| Rhizobium sp. OAE497 | 0.43 | ABIE40_RS17030 | | response regulator | 0.29 | ABIE40_RS04205 | | RidA family protein | low | > 107 |
Not shown: 33 genomes with orthologs for Psyr_3511 only; 13 genomes with orthologs for Psyr_2243 only