Conservation of cofitness between Psyr_1498 and Psyr_0726 in Pseudomonas syringae pv. syringae B728a

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1498 Heavy metal sensor kinase 1.0 Psyr_0726 ribosomal large subunit pseudouridine synthase D 0.43 3
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1498 Heavy metal sensor kinase 1.00 Psyr_0726 ribosomal large subunit pseudouridine synthase D low > 86
Pseudomonas putida KT2440 0.52 PP_5384 copper sensor protein 0.86 PP_0623 23S rRNA pseudouridine(1911,1915,1917) synthase — —
Pseudomonas stutzeri RCH2 0.43 Psest_1599 heavy metal sensor kinase 0.86 Psest_0709 pseudouridine synthase, RluA family low > 67
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_00360 ATPase 0.97 AO353_14220 ribosomal large subunit pseudouridine synthase D low > 101
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_68 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.93 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4600 Heavy metal sensor histidine kinase 0.30 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) low > 79
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_4018 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.92 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) — —
Pseudomonas simiae WCS417 0.33 PS417_07680 ATPase 0.96 PS417_03820 ribosomal large subunit pseudouridine synthase D — —
Pseudomonas fluorescens SBW25 0.33 PFLU_RS07755 heavy metal sensor histidine kinase 0.96 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS07755 heavy metal sensor histidine kinase 0.96 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 109
Acinetobacter radioresistens SK82 0.32 MPMX26_03115 Sensor histidine kinase CusS 0.45 MPMX26_00735 Ribosomal large subunit pseudouridine synthase D low > 36
Pseudomonas sp. S08-1 0.32 OH686_22675 Heavy metal sensor histidine kinase 0.83 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase low > 80
Castellaniella sp019104865 MT123 0.31 ABCV34_RS01455 Cu(+)/Ag(+) sensor histidine kinase 0.35 ABCV34_RS01885 RluA family pseudouridine synthase low > 48
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_2267 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.92 Pf6N2E2_5127 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) — —
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_02220 ATPase 0.96 AO356_15925 ribosomal large subunit pseudouridine synthase D low > 104
Ralstonia solanacearum PSI07 0.31 RPSI07_RS02350 two-component sensor histidine kinase 0.43 RPSI07_RS15970 RluA family pseudouridine synthase low > 81
Ralstonia solanacearum GMI1000 0.30 RS_RS20250 two-component sensor histidine kinase 0.43 RS_RS08205 RluA family pseudouridine synthase low > 80
Pseudomonas sp. RS175 0.30 PFR28_01133 Sensor histidine kinase CusS 0.92 PFR28_03748 Ribosomal large subunit pseudouridine synthase D low > 88
Ralstonia solanacearum UW163 0.30 UW163_RS21990 two-component sensor histidine kinase 0.42 UW163_RS14830 RluA family pseudouridine synthase — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS20855 two-component sensor histidine kinase 0.42 RALBFv3_RS01520 RluA family pseudouridine synthase 0.31 54
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_1662 heavy metal sensor kinase 0.54 B158DRAFT_2532 Pseudouridylate synthases, 23S RNA-specific low > 40
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF1121 Heavy metal sensor histidine kinase 0.34 GFF4870 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) low > 90
Shewanella sp. ANA-3 0.28 Shewana3_4295 sensor kinase CusS (RefSeq) 0.56 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.28 MIT1002_00246 Sensor kinase CusS 0.55 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D low > 70
Enterobacter asburiae PDN3 0.27 EX28DRAFT_1164 heavy metal sensor kinase 0.54 EX28DRAFT_2695 pseudouridine synthase, RluA family low > 76
Enterobacter sp. TBS_079 0.27 MPMX20_02320 Sensor histidine kinase CusS 0.54 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D low > 85
Dickeya dianthicola 67-19 0.26 HGI48_RS03480 Cu(+)/Ag(+) sensor histidine kinase 0.58 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 71
Dickeya dianthicola ME23 0.26 DZA65_RS03590 heavy metal sensor histidine kinase 0.58 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 75

Not shown: 1 genomes with orthologs for Psyr_1498 only; 65 genomes with orthologs for Psyr_0726 only