Conservation of cofitness between Psyr_3238 and Psyr_0401 in Pseudomonas syringae pv. syringae B728a

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3238 3-oxoacid CoA-transferase 1.0 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 0.63 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3238 3-oxoacid CoA-transferase 1.00 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) low > 86
Pseudomonas sp. RS175 0.93 PFR28_01324 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B 0.94 PFR28_05005 NADP-dependent malic enzyme low > 88
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_5834 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) 0.94 Pf1N1B4_1545 NADP-dependent malic enzyme (EC 1.1.1.40) low > 87
Pseudomonas sp. SVBP6 0.93 COO64_RS07680 CoA transferase subunit B 0.91 COO64_RS13045 malic enzyme-like NAD(P)-binding protein low > 93
Pseudomonas sp. BP01 0.93 JOY50_RS21480 CoA transferase subunit B 0.91 JOY50_RS09270 malic enzyme-like NAD(P)-binding protein low > 84
Pseudomonas sp. DMC3 0.93 GFF996 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B 0.93 GFF3092 NADP-dependent malic enzyme low > 89
Pseudomonas segetis P6 0.92 MPMX49_02806 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B 0.91 MPMX49_04241 NADP-dependent malic enzyme low > 75
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_21645 succinyl-CoA--3-ketoacid-CoA transferase 0.94 AO356_09425 malate dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data) 0.94 Pf6N2E2_3762 NADP-dependent malic enzyme (EC 1.1.1.40) low > 103
Pseudomonas putida KT2440 0.92 PP_3123 acetoacetyl CoA-transferase (subunit B) 0.91 PP_5085 malic enzyme B 0.18 47
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_27940 succinyl-CoA--3-ketoacid-CoA transferase 0.94 AO353_12460 malate dehydrogenase low > 101
Pseudomonas aeruginosa PA14 0.91 IKLFDK_09775 succinyl-CoA--3-ketoacid-CoA transferase 0.86 IKLFDK_28295 malate dehydrogenase low > 100
Pseudomonas simiae WCS417 0.91 PS417_10520 succinyl-CoA:3-ketoacid-CoA transferase 0.92 PS417_01950 malate dehydrogenase low > 88
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS10580 CoA transferase subunit B 0.92 PFLU_RS01995 malate dehydrogenase low > 109
Pseudomonas lactucae CFBP13502 0.91 GEMAOFIL_02198 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B 0.91 GEMAOFIL_00623 NADP-dependent malic enzyme low > 93
Pseudomonas fluorescens SBW25 0.91 PFLU_RS10580 CoA transferase subunit B 0.92 PFLU_RS01995 malate dehydrogenase low > 109
Shewanella amazonensis SB2B 0.84 Sama_1356 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit B (from data) 0.66 Sama_0448 malate dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.83 Shew_2576 3-oxoacid CoA-transferase, B subunit (RefSeq) 0.67 Shew_0383 malate dehydrogenase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.83 SO1891 3-oxoadipate CoA-succinyl transferase, beta subunit (NCBI ptt file) 0.66 SO4118 malate oxidoreductase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.82 Shewana3_1666 butyryl-CoA:acetate CoA transferase (RefSeq) 0.65 Shewana3_3669 malic enzyme, NAD-binding (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.79 B158DRAFT_2504 3-oxoacid CoA-transferase, B subunit 0.36 B158DRAFT_0593 Malic enzyme low > 40
Alteromonas macleodii MIT1002 0.79 MIT1002_02000 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B 0.69 MIT1002_03668 NADP-dependent malic enzyme low > 70
Pseudomonas stutzeri RCH2 0.59 Psest_1077 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) 0.89 Psest_3721 Malic enzyme low > 67

Not shown: 57 genomes with orthologs for Psyr_3238 only; 7 genomes with orthologs for Psyr_0401 only