Conservation of cofitness between Psyr_4909 and Psyr_0090 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.0 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.59 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.00 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme low > 86
Pseudomonas simiae WCS417 0.89 PS417_01505 gamma-aminobutyrate transporter 0.90 PS417_00900 4-aminobutyrate aminotransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS01545 GABA permease 0.90 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.39 1
Pseudomonas fluorescens SBW25 0.89 PFLU_RS01545 GABA permease 0.90 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase low > 109
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_12005 GABA permease 0.90 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_375 transport permease protein of gamma-aminobutyrate 0.90 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_4195 transport permease protein of gamma-aminobutyrate 0.90 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) low > 103
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_1639 transport permease protein of gamma-aminobutyrate 0.90 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 87
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_11625 GABA permease 0.89 AO356_10715 4-aminobutyrate aminotransferase low > 104
Pseudomonas sp. RS175 0.81 PFR28_04595 GABA permease 0.90 PFR28_04756 5-aminovalerate aminotransferase DavT 0.51 1
Pseudomonas putida KT2440 0.79 PP_0284 gamma-aminobutyrate permease 0.87 PP_0214 4-aminobutyrate aminotransferase low > 96
Pantoea sp. MT58 0.72 IAI47_19470 GABA permease 0.52 IAI47_19475 4-aminobutyrate--2-oxoglutarate transaminase 0.40 11
Escherichia coli ECRC99 0.67 KEDOAH_07235 gabP GABA permease 0.76 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase — —
Escherichia coli ECRC101 0.67 MCAODC_11425 gabP GABA permease 0.76 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 87
Escherichia coli ECRC100 0.67 OKFHMN_20905 gabP GABA permease 0.76 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.60 25
Escherichia coli ECRC102 0.67 NIAGMN_18670 gabP GABA permease 0.76 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase — —
Escherichia coli BL21 0.67 ECD_02519 gamma-aminobutyrate transporter 0.76 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent low > 61
Escherichia coli ECRC98 0.67 JDDGAC_24565 gabP GABA permease 0.76 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 86
Escherichia coli ECOR38 0.67 HEPCGN_20160 gabP GABA permease 0.77 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 87
Escherichia coli ECOR27 0.67 NOLOHH_12730 gabP GABA permease 0.76 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 75
Escherichia coli BW25113 0.67 b2663 gabP gamma-aminobutyrate transporter (NCBI) 0.76 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) 0.19 47
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01069 GABA permease 0.76 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT low > 73
Escherichia coli Nissle 1917 0.67 ECOLIN_RS14850 GABA permease 0.76 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase — —
Escherichia fergusonii Becca 0.67 EFB2_01267 GABA permease 0.76 EFB2_01268 4-aminobutyrate aminotransferase GabT low > 86
Escherichia coli ECRC62 0.67 BNILDI_11290 gabP GABA permease 0.76 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF1568 gamma-aminobutyrate (GABA) permease 0.75 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 78
Acinetobacter radioresistens SK82 0.56 MPMX26_01988 GABA permease 0.54 MPMX26_01998 4-aminobutyrate aminotransferase PuuE low > 36
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS31450 amino acid permease 0.55 QEN71_RS19980 4-aminobutyrate--2-oxoglutarate transaminase low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS21680 amino acid permease-associated protein 0.53 BPHYT_RS22435 4-aminobutyrate aminotransferase low > 109
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS33780 GABA permease 0.58 RR42_RS21370 4-aminobutyrate aminotransferase low > 128
Lysobacter sp. OAE881 0.34 ABIE51_RS01430 amino acid permease 0.27 ABIE51_RS02780 aspartate aminotransferase family protein low > 62
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_01668 gamma-aminobutyrate:proton symporter, AAT family 0.54 H281DRAFT_03179 4-aminobutyrate aminotransferase apoenzyme low > 103
Ralstonia solanacearum GMI1000 0.29 RS_RS08880 amino acid permease 0.53 RS_RS00145 4-aminobutyrate--2-oxoglutarate transaminase low > 80
Ralstonia solanacearum PSI07 0.28 RPSI07_RS16340 amino acid permease 0.54 RPSI07_RS23805 4-aminobutyrate--2-oxoglutarate transaminase low > 81

Not shown: 4 genomes with orthologs for Psyr_4909 only; 31 genomes with orthologs for Psyr_0090 only