Conservation of cofitness between PfGW456L13_1428 and PfGW456L13_2155 in Pseudomonas fluorescens GW456-L13

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens GW456-L13 1.0 PfGW456L13_1428 3-dehydroquinate dehydratase II (EC 4.2.1.10) 1.0 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.35 20
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_2750 3-dehydroquinate dehydratase II (EC 4.2.1.10) 0.85 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 87
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_06170 3-dehydroquinate dehydratase 0.88 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 101
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_5062 3-dehydroquinate dehydratase II (EC 4.2.1.10) 0.83 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_15595 3-dehydroquinate dehydratase 0.82 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 104
Pseudomonas sp. RS175 0.90 PFR28_03810 3-dehydroquinate dehydratase 1 0.83 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 88
Pseudomonas simiae WCS417 0.90 PS417_24430 3-dehydroquinate dehydratase 0.82 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 88
Pseudomonas fluorescens SBW25 0.90 PFLU_RS26355 type II 3-dehydroquinate dehydratase 0.82 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS26355 type II 3-dehydroquinate dehydratase 0.82 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas putida KT2440 0.80 PP_2407 3-dehydroquinate dehydratase 2, type II 0.70 PP_1751 methyltransferase/FAD-dependent oxidoreductase — —
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_03215 3-dehydroquinate dehydratase 0.29 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 103
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS22680 3-dehydroquinate dehydratase 0.30 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 109
Paraburkholderia graminis OAS925 0.64 ABIE53_004076 3-dehydroquinate dehydratase-2 0.30 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 113
Erwinia amylovora T8 0.62 OLJFJH_13365 type II 3-dehydroquinate dehydratase 0.31 OLJFJH_11180 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 58
Rahnella sp. WP5 0.60 EX31_RS10180 type II 3-dehydroquinate dehydratase 0.30 EX31_RS19660 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 89
Ralstonia solanacearum PSI07 0.59 RPSI07_RS06200 type II 3-dehydroquinate dehydratase 0.25 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 81
Ralstonia solanacearum GMI1000 0.59 RS_RS23865 3-dehydroquinate dehydratase 2 0.26 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Acidovorax sp. GW101-3H11 0.57 Ac3H11_29 3-dehydroquinate dehydratase II (EC 4.2.1.10) 0.18 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 79
Ralstonia solanacearum UW163 0.57 UW163_RS21700 type II 3-dehydroquinate dehydratase 0.26 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS17450 type II 3-dehydroquinate dehydratase 0.26 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.55 A4249_RS07995 type II 3-dehydroquinate dehydratase 0.17 A4249_RS15340 tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD low > 48
Variovorax sp. SCN45 0.55 GFF2936 3-dehydroquinate dehydratase II (EC 4.2.1.10) 0.17 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 127
Variovorax sp. OAS795 0.54 ABID97_RS10255 type II 3-dehydroquinate dehydratase 0.18 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_01959 3-dehydroquinate dehydratase 0.16 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC low > 67
Caulobacter crescentus NA1000 0.53 CCNA_01959 3-dehydroquinate dehydratase 0.16 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC low > 66

Not shown: 20 genomes with orthologs for PfGW456L13_1428 only; 42 genomes with orthologs for PfGW456L13_2155 only