Conservation of cofitness between Pf1N1B4_1186 and Pf1N1B4_702 in Pseudomonas fluorescens FW300-N1B4

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_1186 L-lactate permease 1.0 Pf1N1B4_702 Transcriptional regulator PobR, AraC family 0.32 16
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS25945 L-lactate permease 0.71 PFLU_RS07430 helix-turn-helix domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.96 PFLU_RS25945 L-lactate permease 0.71 PFLU_RS07430 helix-turn-helix domain-containing protein low > 109
Pseudomonas simiae WCS417 0.96 PS417_24105 D-lactate transporter (lctP family) (from data) 0.71 PS417_07325 AraC family transcriptional regulator low > 88
Pseudomonas sp. RS175 0.94 PFR28_00063 Glycolate permease GlcA 0.87 PFR28_00546 HTH-type transcriptional activator RhaS low > 88
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_07550 L-lactate and D-lactate permease (lctP family) (from data) 0.88 AO356_05290 AraC family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_3380 L-lactate permease 0.88 Pf6N2E2_2913 Transcriptional regulator PobR, AraC family low > 103
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_5114 L-lactate permease 0.92 PfGW456L13_1788 Transcriptional regulator PobR, AraC family low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_05700 L-lactate permease 0.91 AO353_03890 AraC family transcriptional regulator low > 101
Pseudomonas putida KT2440 0.90 PP_4735 L-lactate permease 0.49 PP_3538 transcriptional regulator low > 96
Escherichia coli BL21 0.75 ECD_02843 glycolate transporter 0.18 ECD_04223 HpaA low > 61
Escherichia fergusonii Becca 0.75 EFB2_00840 Glycolate permease GlcA 0.10 EFB2_02296 HTH-type transcriptional activator RhaS low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00732 Glycolate permease GlcA 0.18 OHPLBJKB_03717 HTH-type transcriptional activator RhaR low > 73
Escherichia coli ECOR27 0.75 NOLOHH_10950 glcA glycolate permease GlcA 0.18 NOLOHH_03750 hpaA 4-hydroxyphenylacetate catabolism regulatory protein HpaA low > 75
Escherichia coli BW25113 0.75 b2975 yghK glycolate transporter (NCBI) 0.10 b1696 ydiP predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli Nissle 1917 0.75 ECOLIN_RS17115 glycolate permease GlcA 0.10 ECOLIN_RS09475 AraC family transcriptional regulator — —
Escherichia coli ECRC62 0.75 BNILDI_00565 glcA glycolate permease GlcA 0.18 BNILDI_07850 hpaA 4-hydroxyphenylacetate catabolism regulatory protein HpaA low > 75
Escherichia coli ECOR38 0.75 HEPCGN_18025 glcA glycolate permease GlcA 0.10 HEPCGN_05565 araC AraC family transcriptional regulator low > 87
Azospirillum brasilense Sp245 0.69 AZOBR_RS25125 L-lactate permease 0.22 AZOBR_RS28145 putative transcriptional regulator AraC/XylS family low > 97
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS21280 L-lactate permease 0.25 RR42_RS29055 AraC family transcriptional regulator low > 128
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS10155 lactate permease LctP family transporter 0.25 QEN71_RS15620 helix-turn-helix domain-containing protein low > 153
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF411 L-lactate permease 0.17 GFF3285 Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family low > 78
Escherichia coli ECRC101 0.63 MCAODC_06290 lldP L-lactate permease 0.10 MCAODC_18230 ydiP Uncharacterized HTH-type transcriptional regulator YdiP low > 87
Escherichia coli ECRC98 0.63 JDDGAC_19405 lldP L-lactate permease 0.10 JDDGAC_01755 ydiP Uncharacterized HTH-type transcriptional regulator YdiP low > 86
Escherichia coli ECRC100 0.63 OKFHMN_15780 lldP L-lactate permease 0.10 OKFHMN_27180 ydiP Uncharacterized HTH-type transcriptional regulator YdiP low > 80
Escherichia coli ECRC102 0.63 NIAGMN_13540 lldP L-lactate permease 0.10 NIAGMN_00885 ydiP Uncharacterized HTH-type transcriptional regulator YdiP — —
Enterobacter sp. TBS_079 0.62 MPMX20_00131 L-lactate permease 0.17 MPMX20_00635 HTH-type transcriptional activator RhaR low > 85
Klebsiella michiganensis M5al 0.62 BWI76_RS27185 L-lactate/D-lactate permease (from data) 0.18 BWI76_RS03835 4-hydroxyphenylacetate catabolism regulatory protein HpaA low > 92
Enterobacter asburiae PDN3 0.62 EX28DRAFT_3853 L-lactate transport 0.18 EX28DRAFT_3540 4-hydroxyphenylacetate catabolism regulatory protein HpaA low > 76
Castellaniella sp019104865 MT123 0.62 ABCV34_RS10295 L-lactate permease 0.33 ABCV34_RS02730 helix-turn-helix domain-containing protein low > 48
Paraburkholderia graminis OAS925 0.31 ABIE53_002860 lactate permease 0.21 ABIE53_001115 AraC family transcriptional activator of pobA low > 113
Pseudomonas stutzeri RCH2 0.15 Psest_0955 D,L-lactate:H+ symporter (from data) 0.21 Psest_2188 AraC-type DNA-binding domain-containing proteins low > 67
Serratia liquefaciens MT49 0.11 IAI46_20615 L-lactate permease 0.19 IAI46_02765 4-hydroxyphenylacetate catabolism regulatory protein HpaA low > 86

Not shown: 23 genomes with orthologs for Pf1N1B4_1186 only; 19 genomes with orthologs for Pf1N1B4_702 only