Conservation of cofitness between Pf1N1B4_3850 and Pf1N1B4_4314 in Pseudomonas fluorescens FW300-N1B4

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_3850 Guanine deaminase (EC 3.5.4.3) 1.0 Pf1N1B4_4314 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD 0.40 11
Pseudomonas simiae WCS417 0.95 PS417_20900 guanine deaminase 0.54 PS417_13125 ATP-dependent DNA ligase low > 88
Pseudomonas fluorescens SBW25 0.95 PFLU_RS22515 guanine deaminase 0.55 PFLU_RS14185 DNA ligase D low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS22515 guanine deaminase 0.55 PFLU_RS14185 DNA ligase D low > 109
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_02575 guanine deaminase 0.80 AO356_26950 ATP-dependent DNA ligase low > 104
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_2339 Guanine deaminase (EC 3.5.4.3) 0.80 Pf6N2E2_1216 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD low > 103
Pseudomonas sp. RS175 0.93 PFR28_01061 Guanine deaminase 0.79 PFR28_02106 Multifunctional non-homologous end joining protein LigD low > 88
Pseudomonas putida KT2440 0.86 PP_4281 guanine deaminase 0.63 PP_3260 DNA ligase D low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_1812 guanine deaminase 0.52 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_1812 guanine deaminase 0.52 Psyr_3245 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module low > 86
Pseudomonas stutzeri RCH2 0.75 Psest_1208 guanine deaminase 0.62 Psest_2179 DNA ligase D low > 67
Lysobacter sp. OAE881 0.55 ABIE51_RS09675 guanine deaminase 0.30 ABIE51_RS12760 DNA ligase D low > 62
Bosea sp. OAE506 0.53 ABIE41_RS21745 guanine deaminase 0.35 ABIE41_RS04575 DNA ligase D low > 77
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS16335 guanine deaminase 0.39 HSERO_RS11360 DNA ligase low > 78
Sinorhizobium meliloti 1021 0.51 SM_b21293 guanine deaminase 0.34 SMc03959 hypothetical protein low > 103
Rhizobium sp. OAE497 0.50 ABIE40_RS25220 guanine deaminase 0.34 ABIE40_RS26435 DNA ligase D low > 107
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS15100 guanine deaminase 0.51 BPHYT_RS09215 ATP-dependent DNA ligase low > 109
Paraburkholderia graminis OAS925 0.49 ABIE53_003192 guanine deaminase 0.51 ABIE53_002080 bifunctional non-homologous end joining protein LigD low > 113
Ralstonia solanacearum PSI07 0.48 RPSI07_RS14150 guanine deaminase 0.52 RPSI07_RS21105 DNA ligase D low > 81
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS03900 guanine deaminase 0.51 QEN71_RS22145 DNA ligase D low > 153
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS05320 guanine deaminase 0.41 RR42_RS37085 ATP-dependent DNA ligase low > 128
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS15060 guanine deaminase 0.54 ABZR87_RS08115 DNA ligase D low > 80
Agrobacterium fabrum C58 0.47 Atu2315 guanine deaminase 0.34 Atu4632 ATP-dependent DNA ligase low > 89
Variovorax sp. SCN45 0.42 GFF1914 Guanine deaminase (EC 3.5.4.3) 0.49 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF213 Guanine deaminase (EC 3.5.4.3) 0.42 GFF111 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD low > 90

Not shown: 39 genomes with orthologs for Pf1N1B4_3850 only; 8 genomes with orthologs for Pf1N1B4_4314 only