Conservation of cofitness between Pf1N1B4_1241 and Pf1N1B4_3547 in Pseudomonas fluorescens FW300-N1B4

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_1241 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) 1.0 Pf1N1B4_3547 DNA-binding response regulator 0.25 9
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_3465 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) 0.96 Pf6N2E2_5621 DNA-binding response regulator low > 103
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_5 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) 0.99 PfGW456L13_4409 DNA-binding response regulator low > 87
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_07965 TetR family transcriptional regulator 0.96 AO356_18475 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_06095 TetR family transcriptional regulator 0.96 AO353_18500 chemotaxis protein CheY low > 101
Pseudomonas sp. RS175 0.91 PFR28_05260 HTH-type transcriptional regulator RutR 0.96 PFR28_03323 Transcriptional regulatory protein CpxR low > 88
Pseudomonas simiae WCS417 0.88 PS417_03230 TetR family transcriptional regulator 0.96 PS417_22295 chemotaxis protein CheY — —
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0675 transcriptional regulator, TetR family 0.88 Psyr_3589 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0675 transcriptional regulator, TetR family 0.88 Psyr_3589 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS03310 TetR/AcrR family transcriptional regulator 0.96 PFLU_RS23935 response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS03310 TetR/AcrR family transcriptional regulator 0.96 PFLU_RS23935 response regulator transcription factor low > 109
Pseudomonas putida KT2440 0.86 PP_0594 Transcriptional regulator, TetR family 0.90 PP_4503 DNA-binding response regulator low > 96
Pseudomonas stutzeri RCH2 0.70 Psest_1439 Transcriptional regulator 0.84 Psest_1884 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 67
Pseudomonas sp. S08-1 0.68 OH686_07330 Transcriptional regulator, AcrR family 0.84 OH686_20775 Two-component transcriptional response regulator, LuxR family low > 80
Alteromonas macleodii MIT1002 0.48 MIT1002_01576 Rut operon repressor 0.40 MIT1002_00477 Response regulator ArlR low > 70
Ralstonia solanacearum PSI07 0.39 RPSI07_RS18005 TetR/AcrR family transcriptional regulator 0.38 RPSI07_RS02400 DNA-binding response regulator low > 81
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_02653 HTH-type transcriptional regulator RutR 0.41 OHPLBJKB_04138 Transcriptional regulatory protein CpxR low > 73
Escherichia coli BL21 0.38 ECD_01016 rut operon transcriptional repressor for 0.41 ECD_03798 response regulator in two-component regulatory system with CpxA — —
Escherichia coli ECRC100 0.37 OKFHMN_04610 rutR HTH-type transcriptional regulator RutR 0.41 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR low > 80
Escherichia coli ECRC102 0.37 NIAGMN_23725 rutR HTH-type transcriptional regulator RutR 0.41 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECRC99 0.37 KEDOAH_23135 rutR HTH-type transcriptional regulator RutR 0.41 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECRC98 0.37 JDDGAC_08220 rutR HTH-type transcriptional regulator RutR 0.41 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR low > 86
Escherichia coli ECRC101 0.37 MCAODC_23995 rutR HTH-type transcriptional regulator RutR 0.41 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR low > 87
Escherichia fergusonii Becca 0.37 EFB2_03067 HTH-type transcriptional regulator RutR 0.41 EFB2_04705 Transcriptional regulatory protein CpxR low > 86
Escherichia coli ECRC62 0.37 BNILDI_19675 rutR HTH-type transcriptional regulator RutR 0.41 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR low > 75
Escherichia coli ECOR27 0.37 NOLOHH_21510 rutR HTH-type transcriptional regulator RutR 0.41 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR low > 75
Escherichia coli ECOR38 0.37 HEPCGN_23530 rutR HTH-type transcriptional regulator RutR 0.41 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR low > 87
Escherichia coli Nissle 1917 0.37 ECOLIN_RS05285 HTH-type transcriptional regulator RutR 0.41 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR — —
Escherichia coli BW25113 0.37 b1013 ycdC predicted DNA-binding transcriptional regulator (NCBI) 0.41 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) low > 76
Klebsiella michiganensis M5al 0.36 BWI76_RS10785 transcriptional regulator 0.41 BWI76_RS00720 DNA-binding response regulator low > 92
Pantoea sp. MT58 0.36 IAI47_12505 HTH-type transcriptional regulator RutR 0.41 IAI47_00760 envelope stress response regulator transcription factor CpxR low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF3299 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) 0.41 GFF2280 Copper-sensing two-component system response regulator CpxR low > 78
Enterobacter asburiae PDN3 0.35 EX28DRAFT_1913 transcriptional regulator, TetR family 0.41 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Serratia liquefaciens MT49 0.35 IAI46_09055 HTH-type transcriptional regulator RutR 0.39 IAI46_18475 response regulator transcription factor low > 86
Rahnella sp. WP5 0.34 EX31_RS24095 HTH-type transcriptional regulator RutR 0.41 EX31_RS14320 envelope stress response regulator transcription factor CpxR low > 89
Enterobacter sp. TBS_079 0.34 MPMX20_01700 HTH-type transcriptional regulator RutR 0.41 MPMX20_04556 Transcriptional regulatory protein CpxR low > 85
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS09915 TetR/AcrR family transcriptional regulator 0.43 ABZR86_RS07815 response regulator low > 74

Not shown: 13 genomes with orthologs for Pf1N1B4_1241 only; 18 genomes with orthologs for Pf1N1B4_3547 only