Conservation of cofitness between Pf1N1B4_826 and Pf1N1B4_2483 in Pseudomonas fluorescens FW300-N1B4

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_826 tRNA (5-methoxyuridine) 34 synthase 1.0 Pf1N1B4_2483 DNA-binding domain of ModE / Molybdate-binding domain of ModE 0.30 9
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_4812 tRNA (5-methoxyuridine) 34 synthase 0.81 PfGW456L13_1145 DNA-binding domain of ModE / Molybdate-binding domain of ModE low > 87
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_16015 tRNA (mo5U34)-methyltransferase 0.84 AO353_07535 ModE family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_3158 tRNA (5-methoxyuridine) 34 synthase 0.74 Pf6N2E2_4757 DNA-binding domain of ModE / Molybdate-binding domain of ModE low > 103
Pseudomonas simiae WCS417 0.94 PS417_05220 tRNA methyltransferase 0.74 PS417_26015 ModE family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_06450 tRNA (mo5U34)-methyltransferase 0.75 AO356_14125 ModE family transcriptional regulator low > 104
Pseudomonas fluorescens SBW25 0.93 PFLU_RS05290 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.73 PFLU_RS27660 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS05290 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.73 PFLU_RS27660 LysR family transcriptional regulator low > 109
Pseudomonas sp. RS175 0.92 PFR28_00318 tRNA U34 carboxymethyltransferase 0.72 PFR28_04105 DNA-binding transcriptional dual regulator ModE low > 88
Pseudomonas putida KT2440 0.87 PP_1440 tRNA (mo5U34)-methyltransferase 0.66 PP_0360 Molybdate transport regulator low > 96
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_3947 Methyltransferase, putative 0.72 Psyr_4689 Helix-turn-helix, Fis-type:Molybdenum-binding protein, N-terminal:Molybdenum-pterin binding protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_3947 Methyltransferase, putative 0.72 Psyr_4689 Helix-turn-helix, Fis-type:Molybdenum-binding protein, N-terminal:Molybdenum-pterin binding protein low > 86
Pseudomonas sp. S08-1 0.76 OH686_05375 tRNA (mo5U34)-methyltransferase 0.57 OH686_10365 DNA-binding domain of ModE / Molybdate-binding domain of ModE low > 80
Klebsiella michiganensis M5al 0.56 BWI76_RS18195 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 BWI76_RS08635 molybdenum-dependent transcriptional regulator low > 92
Escherichia coli ECRC101 0.56 MCAODC_19185 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 MCAODC_25925 modE molybdenum-dependent transcriptional regulator low > 87
Escherichia coli ECRC102 0.56 NIAGMN_01840 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 NIAGMN_04755 modE molybdenum-dependent transcriptional regulator — —
Escherichia coli ECRC99 0.56 KEDOAH_01885 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 KEDOAH_21260 modE molybdenum-dependent transcriptional regulator — —
Escherichia coli ECRC62 0.56 BNILDI_15455 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.27 BNILDI_21130 modE molybdenum-dependent transcriptional regulator low > 75
Escherichia coli ECRC100 0.56 OKFHMN_26220 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 OKFHMN_06705 modE molybdenum-dependent transcriptional regulator low > 80
Escherichia coli ECRC98 0.56 JDDGAC_00795 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 JDDGAC_10360 modE molybdenum-dependent transcriptional regulator low > 86
Escherichia coli ECOR38 0.55 HEPCGN_04630 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 HEPCGN_01570 modE molybdenum-dependent transcriptional regulator low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_01857 tRNA U34 carboxymethyltransferase 0.28 OHPLBJKB_02952 Transcriptional regulator ModE low > 73
Enterobacter sp. TBS_079 0.55 MPMX20_02776 tRNA U34 carboxymethyltransferase 0.27 MPMX20_01388 DNA-binding transcriptional dual regulator ModE low > 85
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0686 tRNA (mo5U34)-methyltransferase 0.28 EX28DRAFT_2234 ModE molybdate transport repressor domain/molybdenum-pterin binding domain low > 76
Escherichia coli ECOR27 0.55 NOLOHH_16665 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 NOLOHH_23135 modE molybdenum-dependent transcriptional regulator low > 75
Escherichia fergusonii Becca 0.55 EFB2_02071 tRNA U34 carboxymethyltransferase 0.28 EFB2_03345 DNA-binding transcriptional dual regulator ModE low > 86
Escherichia coli BW25113 0.55 b1871 yecP predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) 0.28 b0761 modE DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli Nissle 1917 0.55 ECOLIN_RS10700 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 ECOLIN_RS04055 molybdenum-dependent transcriptional regulator — —
Dickeya dadantii 3937 0.55 DDA3937_RS10035 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.27 DDA3937_RS06625 molybdenum-dependent transcriptional regulator low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF1652 tRNA (5-methoxyuridine) 34 synthase 0.26 GFF655 DNA-binding domain of ModE / Molybdate-binding domain of ModE low > 78
Pantoea sp. MT58 0.55 IAI47_08405 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.29 IAI47_13575 molybdenum-dependent transcriptional regulator low > 76
Dickeya dianthicola 67-19 0.55 HGI48_RS10065 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.27 HGI48_RS06645 molybdenum-dependent transcriptional regulator low > 71
Dickeya dianthicola ME23 0.54 DZA65_RS10475 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.27 DZA65_RS07000 molybdenum-dependent transcriptional regulator low > 75
Shewanella oneidensis MR-1 0.54 SO2436 methyltransferase, putative (NCBI ptt file) 0.24 SO3862 modE molybdenum transport regulatory protein ModE (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.53 IAI46_14675 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.28 IAI46_06450 molybdenum-dependent transcriptional regulator low > 86
Shewanella sp. ANA-3 0.53 Shewana3_1950 putative methyltransferase (RefSeq) 0.26 Shewana3_0744 ModE family transcriptional regulator (RefSeq) low > 73
Rahnella sp. WP5 0.53 EX31_RS17290 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.27 EX31_RS23600 molybdenum-dependent transcriptional regulator low > 89
Pectobacterium carotovorum WPP14 0.52 HER17_RS11890 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 0.29 HER17_RS14755 molybdenum-dependent transcriptional regulator low > 75

Not shown: 9 genomes with orthologs for Pf1N1B4_826 only; 21 genomes with orthologs for Pf1N1B4_2483 only