Conservation of cofitness between PP_1907 and PP_5338 in Pseudomonas putida KT2440

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1907 Hydrolase, haloacid dehalogenase-like family 1.0 PP_5338 aspartate ammonia-lyase 0.21 12
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_01400 HAD family hydrolase 0.93 AO353_09950 aspartate ammonia-lyase low > 101
Pseudomonas simiae WCS417 0.68 PS417_21475 HAD family hydrolase 0.93 PS417_28130 aspartate ammonia-lyase
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS23090 HAD-IA family hydrolase 0.93 PFLU_RS29815 aspartate ammonia-lyase low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS23090 HAD-IA family hydrolase 0.93 PFLU_RS29815 aspartate ammonia-lyase low > 109
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_458 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C 0.93 Pf1N1B4_2025 Aspartate ammonia-lyase (EC 4.3.1.1)
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_2098 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C 0.92 PfGW456L13_742 Aspartate ammonia-lyase (EC 4.3.1.1) low > 87
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_1640 HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.92 Psyr_5051 Aspartate ammonia-lyase low > 86
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_20130 HAD family hydrolase 0.94 AO356_11090 aspartate ammonia-lyase low > 104
Pseudomonas sp. RS175 0.66 PFR28_03017 hypothetical protein 0.93 PFR28_04498 Aspartate ammonia-lyase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_1640 HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.92 Psyr_5051 Aspartate ammonia-lyase low > 86
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_5945 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C 0.94 Pf6N2E2_4085 Aspartate ammonia-lyase (EC 4.3.1.1)
Pseudomonas sp. S08-1 0.58 OH686_22100 phosphoglycolate phosphatase 0.88 OH686_13315 Aspartate ammonia-lyase
Pseudomonas stutzeri RCH2 0.55 Psest_1681 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 0.84 Psest_4074 Aspartate ammonia-lyase
Acinetobacter radioresistens SK82 0.41 MPMX26_00318 Pyrophosphatase PpaX 0.51 MPMX26_01469 Aspartate ammonia-lyase low > 36
Shewanella amazonensis SB2B 0.38 Sama_1987 HAD family hydrolase (RefSeq) 0.58 Sama_0789 aspartate ammonia-lyase (RefSeq) low > 62
Dechlorosoma suillum PS 0.36 Dsui_2438 haloacid dehalogenase superfamily enzyme, subfamily IA 0.56 Dsui_3481 aspartate ammonia-lyase low > 51
Variovorax sp. SCN45 0.36 GFF3848 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C 0.52 GFF4594 Aspartate ammonia-lyase (EC 4.3.1.1) low > 127
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS04505 HAD-IA family hydrolase 0.56 QEN71_RS33820 aspartate ammonia-lyase low > 153
Variovorax sp. OAS795 0.34 ABID97_RS08255 HAD-IA family hydrolase 0.52 ABID97_RS05930 aspartate ammonia-lyase low > 91
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS14150 haloacid dehalogenase 0.59 RR42_RS26135 aspartate ammonia-lyase low > 128
Castellaniella sp019104865 MT123 0.30 ABCV34_RS08410 HAD-IA family hydrolase 0.46 ABCV34_RS07730 aspartate ammonia-lyase low > 48
Azospirillum sp. SherDot2 0.26 MPMX19_01717 Pyrophosphatase PpaX 0.57 MPMX19_03594 Aspartate ammonia-lyase low > 112
Agrobacterium fabrum C58 0.23 Atu1472 hydrolase 0.53 Atu3793 aspartate ammonia-lyase low > 89
Dickeya dadantii 3937 0.23 DDA3937_RS20870 HAD family hydrolase 0.51 DDA3937_RS02720 aspartate ammonia-lyase low > 74
Dickeya dianthicola 67-19 0.23 HGI48_RS00375 HAD-IA family hydrolase 0.51 HGI48_RS02695 aspartate ammonia-lyase low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS00375 HAD family hydrolase 0.51 DZA65_RS02850 aspartate ammonia-lyase low > 75
Bacteroides ovatus ATCC 8483 0.20 BACOVA_05115 HAD hydrolase, family IA, variant 1 0.54 BACOVA_01069 aspartate ammonia-lyase low > 94
Bifidobacterium breve UCC2003 0.19 BBR_RS17810 HAD family hydrolase 0.44 BBR_RS12120 aspartate ammonia-lyase low > 34
Bacteroides thetaiotaomicron VPI-5482 0.18 BT4315 HPr(Ser) phosphatase (NCBI ptt file) 0.54 BT2755 aspartate ammonia-lyase (NCBI ptt file) low > 81

Not shown: 29 genomes with orthologs for PP_1907 only; 28 genomes with orthologs for PP_5338 only