Conservation of cofitness between PP_2337 and PP_4964 in Pseudomonas putida KT2440

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2337 aconitate isomerase 1.0 PP_4964 D-erythrose 4-phosphate dehydrogenase 0.32 10
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4115 2-methylaconitate cis-trans isomerase 0.88 PfGW456L13_1065 D-erythrose-4-phosphate dehydrogenase
Pseudomonas simiae WCS417 0.84 PS417_21065 3-methylitaconate isomerase 0.88 PS417_26435 glyceraldehyde-3-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_00885 3-methylitaconate isomerase 0.89 AO353_07950 glyceraldehyde-3-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase 0.89 Pf1N1B4_2398 D-erythrose-4-phosphate dehydrogenase
Pseudomonas fluorescens SBW25 0.84 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.90 PFLU_RS28090 erythrose-4-phosphate dehydrogenase
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.90 PFLU_RS28090 erythrose-4-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_6064 2-methylaconitate isomerase 0.89 Pf6N2E2_4656 D-erythrose-4-phosphate dehydrogenase
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_20880 3-methylitaconate isomerase 0.89 AO356_13685 glyceraldehyde-3-phosphate dehydrogenase low > 104
Pseudomonas sp. RS175 0.82 PFR28_02924 2-methyl-aconitate isomerase 0.89 PFR28_04187 D-erythrose-4-phosphate dehydrogenase
Pseudomonas sp. S08-1 0.82 OH686_01675 probable AcnD-accessory protein PrpF 0.87 OH686_10765 erythrose-4-phosphate dehydrogenase
Shewanella sp. ANA-3 0.81 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.49 Shewana3_3352 erythrose 4-phosphate dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.81 SO0342 conserved hypothetical protein (NCBI ptt file) 0.48 SO0931 epd D-erythrose-4-phosphate dehydrogenase (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.80 Psest_2318 probable AcnD-accessory protein PrpF 0.83 Psest_0329 erythrose-4-phosphate dehydrogenase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase 0.85 Psyr_4791 D-erythrose-4-phosphate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_2088 2-methylaconitate cis-trans isomerase 0.85 Psyr_4791 D-erythrose-4-phosphate dehydrogenase
Acinetobacter radioresistens SK82 0.78 MPMX26_00659 2-methyl-aconitate isomerase 0.38 MPMX26_01087 D-erythrose-4-phosphate dehydrogenase low > 36
Marinobacter adhaerens HP15 0.76 HP15_1929 AcnD-accessory protein PrpF 0.56 HP15_2912 glyceraldehyde 3-phosphate dehydrogenase, type I
Shewanella amazonensis SB2B 0.75 Sama_3297 hypothetical protein (RefSeq) 0.50 Sama_2758 erythrose 4-phosphate dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.74 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) 0.49 Shew_0753 erythrose 4-phosphate dehydrogenase (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 0.48 CSW01_02530 D-erythrose-4-phosphate dehydrogenase low > 62
Alteromonas macleodii MIT1002 0.72 MIT1002_03132 3-methylitaconate isomerase 0.49 MIT1002_00862 D-erythrose-4-phosphate dehydrogenase

Not shown: 19 genomes with orthologs for PP_2337 only; 27 genomes with orthologs for PP_4964 only