Conservation of cofitness between PP_2928 and PP_4782 in Pseudomonas putida KT2440

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2928 Saccharopine dehydrogenase 1.0 PP_4782 Phosphomethylpyrimidine kinase 0.31 12
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_5136 Carboxynorspermidine dehydrogenase 0.78 Pf1N1B4_2718 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 87
Pseudomonas simiae WCS417 0.95 PS417_15470 saccharopine dehydrogenase 0.87 PS417_24600 hydrogenase low > 88
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS17455 saccharopine dehydrogenase family protein 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.30 15
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_1605 Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) 0.78 Pf6N2E2_5024 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) low > 103
Pseudomonas fluorescens SBW25 0.95 PFLU_RS17455 saccharopine dehydrogenase family protein 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 109
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_23425 saccharopine dehydrogenase 0.88 AO356_15435 hydrogenase low > 104
Pseudomonas sp. RS175 0.92 PFR28_01528 Carboxynorspermidine synthase 0.84 PFR28_03843 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.21 75
Pseudomonas stutzeri RCH2 0.89 Psest_1055 Saccharopine dehydrogenase and related proteins 0.78 Psest_0537 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase low > 67
Sinorhizobium meliloti 1021 0.77 SM_b21630 hypothetical protein 0.19 SM_b20962 phoshomethylpyrimidine kinase low > 103
Agrobacterium fabrum C58 0.75 Atu4170 hypothetical protein 0.25 Atu3290 phosphomethylpyrimidine kinase — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_08165 carboxynorspermidine synthase 0.22 CSW01_06545 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 62
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_0331 carboxynorspermidine dehydrogenase 0.21 Ga0059261_1961 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS14845 saccharopine dehydrogenase family protein 0.24 A4249_RS15985 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase — —
Bacteroides thetaiotaomicron VPI-5482 0.36 BT4612 conserved hypothetical protein (NCBI ptt file) 0.29 BT0790 phosphomethylpyrimidine kinase (NCBI ptt file) 0.26 66
Bacteroides stercoris CC31F 0.35 HMPREF1181_RS11900 saccharopine dehydrogenase family protein 0.24 HMPREF1181_RS14705 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 56
Bacteroides ovatus ATCC 8483 0.35 BACOVA_05404 saccharopine dehydrogenase 0.26 BACOVA_02530 phosphomethylpyrimidine kinase low > 94
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_1535 Saccharopine dehydrogenase (RefSeq) 0.20 DvMF_1376 phosphomethylpyrimidine kinase (RefSeq) — —
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS15975 saccharopine dehydrogenase family protein 0.27 HMPREF1058_RS06820 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 67
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS11940 saccharopine dehydrogenase family protein 0.28 ABI39_RS20615 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.48 61
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU0418 lys1 saccharopine dehydrogenase (TIGR) 0.21 DVU0931 thiD phosphomethylpyrimidine kinase (TIGR) — —
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS00110 saccharopine dehydrogenase family protein 0.26 HMPREF1078_RS03470 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase low > 61

Not shown: 1 genomes with orthologs for PP_2928 only; 72 genomes with orthologs for PP_4782 only